Gene Information

Name : Sbal117_4020 (Sbal117_4020)
Accession : YP_006039174.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4637511 - 4638113 bp
Length : 603 bp
Strand : +
Note : KEGG: spc:Sputcn32_0534 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator L

DNA sequence : 
ATGTCTACAAAATTGCCACTGTATTTAGTTGATGACGATGAAGCGATTCTGGATTCGCTGGGTTTTATGCTTGGGCAATT
TGGCTACCAAGTGCAAACCTTCAATAGCGGCCGCGACTTCCTTGCGCACTGTGCATTATCGCAGGCAGGCTGCGTGATTT
TAGATAGCCGAATGCCAGAAATCACCGGCCAAGAAGTGCAGCAAAAACTGATCGAAACCCACAGCCCGCTAGGCGTCATC
TTTCTCACTGGCCACGGCGATTTACCTATGGCGCTGAGCGCCTTTCGTAAGGGAGCCTGCGACTTTTTTCAAAAACCTGT
GTCCGGCAAGGCATTAGTGCAAGCGATAGAAAAGGCGCAACGTGAAAGCCAAACGACCTTCGAGCAGCAAAGTTTACAAC
ATAAGTTTGACCAACTGACCGAGCGCGAGCAGCAAGTGTTAGCCCATGTGATCCAAGGCATGACCAATAAGCAAATCTCG
GAGGCGATGTTTTTATCCCTACGCACGATTGAAGTACACCGAGCAAAAATCATGAAAAAACTCGAAGTGAATAATATGGC
AGAGTTAGTGCAGCACTTAGGACATTTGCATTCTGTTTTATAA

Protein sequence : 
MSTKLPLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQEVQQKLIETHSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQTTFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQIS
EAMFLSLRTIEVHRAKIMKKLEVNNMAELVQHLGHLHSVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 7e-36 42
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-36 42
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 7e-36 42
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 7e-36 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 7e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_4020 YP_006039174.1 LuxR family two component transcriptional regulator VFG0488 Protein 2e-36 42