Gene Information

Name : Sbal117_3933 (Sbal117_3933)
Accession : YP_006039091.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4534050 - 4535213 bp
Length : 1164 bp
Strand : -
Note : KEGG: spc:Sputcn32_0616 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

DNA sequence : 
ATGGCAGAGCGTCAATTAGCCACACTGGCAGTGCGTCAGGGTATCGAAAGCGATACTCAATATGGTGCAGTTGTGCCACC
GATTTATTTGTCGACTAATTACGCCTTCGATGGTCATAAAAATCCCCGCGAATTCGATTACAGTCGTTCAGGCAACCCAA
CGCGCTGCATTTTAGGTGAAGCATTAGCCCAATTAGAAAAGGGCGCCACTGGCATAGTGACATGCACTGGCATGGCGGCC
ATCACCCTAGTGACCACATTGCTCGGCCCTGATGACCTGTTGGTGGTGCCCCATGATTGTTACGGCGGTTCTTACCGTTT
ATTTACTAACTTGGCGAAGAAAGGCCAGTTTAAGTTGATTGTGGTCGATCAAACCGACAGCCAAGCGTTAGCCGCCGCTA
TCGGGCAACATCCTAAGATGGTGTGGCTCGAAACCCCATCTAACCCGCTATTGCGTGTGGTGGATATCGAAGCCATTGCT
AAGGCGAGCCATGAGGTCGGCGCGCTGGTGGTGGTCGATAACACTTTTTTATCGCCGATATTGCAACAACCCCTATTGTT
AGGCGCAGATATCGTTATCCACTCCACCACTAAATATATCAATGGTCACAGCGATGTGGTTGGCGGCGCAGTGGTTGCTA
AAGATGCACAAATTGGCGAAAGCTTACATTGGTGGTCGAACACTTTAGGCTTAACGGGATCGGCTTTCGACAGCTACTTA
ACCCTGCGCGGCCTACGTACCTTAGCGGTGCGAATTCGTGAACATCAAACCAATGCCCAGCACATTGTTGAGGTATTGAC
GCAAAGCCCTGTGGTGAGCAAAGTTTATTACCCTGGTCTTGCGGATCACCCAGGTCATGCCATTGCTGCCAAGCAACAAA
AAGGCTTTGGCGCTATGCTGAGTTTTGAACTCAAGGGCGGCGAGGCCGAAGTGGTGGCCTTTTTAGGTGCACTCAGCTTA
TTTAGTGTGGCGGAAAGTTTAGGTGGCGTTGAAAGTTTGGTGGCCGTGCCCGCAACTATGACCCACAGAGCCATGGAGCC
GCAAGCGCGCTTCGAGGCAGGTATTAAGGACACCCTATTGCGTTTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTG
CAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCTTGTCAGTAG

Protein sequence : 
MAERQLATLAVRQGIESDTQYGAVVPPIYLSTNYAFDGHKNPREFDYSRSGNPTRCILGEALAQLEKGATGIVTCTGMAA
ITLVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLIVVDQTDSQALAAAIGQHPKMVWLETPSNPLLRVVDIEAIA
KASHEVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDAQIGESLHWWSNTLGLTGSAFDSYL
TLRGLRTLAVRIREHQTNAQHIVEVLTQSPVVSKVYYPGLADHPGHAIAAKQQKGFGAMLSFELKGGEAEVVAFLGALSL
FSVAESLGGVESLVAVPATMTHRAMEPQARFEAGIKDTLLRLSVGIEDAADLVADIQAGLAAVAACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-59 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-60 41
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_3933 YP_006039091.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 7e-53 41