Gene Information

Name : Sbal117_3870 (Sbal117_3870)
Accession : YP_006039030.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4442970 - 4444613 bp
Length : 1644 bp
Strand : -
Note : KEGG: vvy:VV0816 type I restriction-modification system methyltransferase subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; PFAM: DNA methylase, adenine-specific

DNA sequence :
ATGACCCAAGAACAACTCAACGATTTAGGTAAAATCCTGTGGGATATCGCCGACAGTTTACGTGGTGCAATGAATGCCGA
TGACTTTCGCGACTATATGTTGTCCTTTTTATTTTTACGATATTTATCAGATAACTATGAAAAAGCGGCGCAAAAAGAAC
TCGGTCGCGATTATCCTATACTGGCTAAAGATGATAAAACTGCACCATTAGCATTGTGGTATACAGAATATAGAGAGGAT
ATAGCTGAATTTGAAAAACAAATGCGTCGTAAACTGCATTATGTGATTGAGCCGCGCCATCTGTGGACTAGCATTGCCGA
ACTTGCACGTACTCAAAATAGCGAGTTACTGCAAACCTTAGAAGCGGGCTTTAAATACATTGAAGAGCAAAGCTTTGACA
GCAGCTTTAAAGGGTTATTTTCTGAGATTAATTTAAACTCTGAAAAGCTCGGTAAATCTCCCACTGATCGTAACAAAAAA
CTTTGTACTATCATTCAAAAAATATCTGAAGGTATTGCCGAGTTTTCTACCGATAGCGATATTTTAGGTGATGCCTATGA
ATATTTAATAGGTGAGTTTGCCGCAGGCTCGGGTAAAAAAGCCGGTGAGTTTTATACTCCGCAACCTATTTCGACTATTT
TGTCGGAAATTGTCACCCTTGACAGTCAAGAGCCAAAAACTGGCAAAAAGAAAAAACTCGACAAGGTATTAGACTTTGCT
TGTGGCTCAGGTTCGTTATTGCTCAATGTGCGTAAGCATATTGTGGATGCGGGCGGTACTGTTGGAAAAATTTACGGCCA
AGAAAAAAATATTACTACCTTTAACCTTGCCCGAATGAACATGCTATTACATGGAGTGAAAGATACCGAGTTTGAGATCC
ACCACGGCGATACTTTATTAAATGATTGGGACATACTCAGTGAGATGAATCCCGCGAAAAAACTTAAATGTGATGCGGTA
GTGGCTAACCCCCCTTTTAGTTACCGCTGGGATCCAAGTGAAGCACAGGGCGAAGATTTCCGTTTTAAAAGCCACGGTTT
AGCGCCAAAATCTGCTGCTGATTTTGCTTTTTTATTGCACGGTTTTCACTTTTTAAGTGATGAAGGCACCATGGCGATTA
TTTTGCCTCATGGCGTATTATTTAGAGGCGGCGCAGAGCAACGTATTCGCAAGAAATTACTCAACGATGGCCATATAGAT
ACGGTCATTGGTTTACCTGCCAATTTATTTTTCTCTACGGGTATCCCTGTTTGCATTATCGTGTTGAAAAAATGTAAAAA
GTACGATGATATATTATTTATTAATGCCAGCGAACATTATGAAAAAGGTAAACGCCAAAATAAGTTACGCGAAGGTAAAG
GTGATGAGCCCAACGACATTAAAAAAATCGTTGAAACTTATCAATACCGTAGTGAAGATGAACGTTACTCACGCCGAGTT
TCGATGGCTGAGATTGAAAAAAACGATTTTAATCTCAATATTTCTCGTTATGTAAGTACCGCAAAAGATACGGTAAAAAT
TGATCTTGCGAAAGAACAGCGAAAACTTGTTGATATAGAAAGTTCAATAACTTCAGCATTGATAGAGCATAATAAATTTT
TATCTGAATTGGGTTTGGCATTGTTGCCAGGTGAGCAAAATTAA

Protein sequence :
MTQEQLNDLGKILWDIADSLRGAMNADDFRDYMLSFLFLRYLSDNYEKAAQKELGRDYPILAKDDKTAPLALWYTEYRED
IAEFEKQMRRKLHYVIEPRHLWTSIAELARTQNSELLQTLEAGFKYIEEQSFDSSFKGLFSEINLNSEKLGKSPTDRNKK
LCTIIQKISEGIAEFSTDSDILGDAYEYLIGEFAAGSGKKAGEFYTPQPISTILSEIVTLDSQEPKTGKKKKLDKVLDFA
CGSGSLLLNVRKHIVDAGGTVGKIYGQEKNITTFNLARMNMLLHGVKDTEFEIHHGDTLLNDWDILSEMNPAKKLKCDAV
VANPPFSYRWDPSEAQGEDFRFKSHGLAPKSAADFAFLLHGFHFLSDEGTMAIILPHGVLFRGGAEQRIRKKLLNDGHID
TVIGLPANLFFSTGIPVCIIVLKKCKKYDDILFINASEHYEKGKRQNKLREGKGDEPNDIKKIVETYQYRSEDERYSRRV
SMAEIEKNDFNLNISRYVSTAKDTVKIDLAKEQRKLVDIESSITSALIEHNKFLSELGLALLPGEQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 2e-91 43
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 5e-90 42
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 9e-90 42
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 4e-90 42
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-90 42
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 3e-90 42
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 3e-90 42
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 3e-90 42
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 3e-90 42
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 6e-90 42
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 5e-90 42
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 9e-90 42
ORF6 BAC22943.1 - Not tested etd PI Protein 6e-90 42
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 8e-90 42
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 6e-90 42
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 6e-90 42
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 8e-90 41
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 7e-89 41
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 4e-89 41
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 1e-89 41
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 1e-89 41
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 9e-90 41