Gene Information

Name : Sbal117_3663 (Sbal117_3663)
Accession : YP_006038831.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Resistance
Product : Beta-lactamase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.2.6
Position : 4235890 - 4236777 bp
Length : 888 bp
Strand : -
Note : KEGG: shw:Sputw3181_0786 beta-lactamase; PFAM: Penicillin-binding protein, transpeptidase

DNA sequence :

ATGCGTTCGTTCGCCATATCGACTGTGTTGGTGATGTCCTCACTGTTAGCGTCGTCAATCATAGCTGCCCCGACATTTGC
CTCAACAGCGGCGAAGACGGAGTGGCAAGAAACCCGCAGTTGGGATGCCATTTTTACTCAGCACCAAGTTGAACTGAAAC
AAGCTAAGCAACAACAAGTTAAACCGCAAAAAACTAAGTCCCAGCAAGCCTCGGGCGTGGTGGTGCTGTGGAACGAAAAC
AAGCAACAGGGATATACCAACAGTCTCAAACGTGCCAATCAAGGTTTTTTACCGGCATCGACCTTTAAAATCCCTAATAG
CTTGATTGCGCTCGAGTTGGGTGTGGTGAAGGATGAGCATCAAGTGTTTAAATGGGATGGTAAAAGTCGTGATATCGACA
CTTGGAATCGTGACCACAACTTGATTACCGGGATGAAGTATTCGGTTGTGCCTGTCTATCAAGAGTTTGCCCGCCAAATA
GGTGAGGCGCGGATGTCGAAGATGATCGCCTCCTTCGATTATGGCAATGAGGATATCTCGGGTAACTTAGATAGCTTTTG
GCTCGATGGCGGTATTCGGATTTCGGCCACTGAGCAAATTGATTTCCTGCGCCGGCTTTATCACAACAAGATCCATGCCT
CAGAGCGCAGTCAACGAATCGTTAAGCAGGCCATGCTCACCGAGGCGAATTCTGACTATATTATTCGCGCAAAAACCGGC
TATGCGGTCAGAGCTGAACCAAGTATTGGCTGGTGGGTGGGTTGGGTAGAACTCGATGATAATGTGTGGTTTTTTGCAAT
GAATATGGATATACCCGACGCCGCCGGTTTGCCATTGCGTCAAGCCATCACGAAGGAAGTTTTAAAACTGGAACACGTTA
TTCCTTAG

Protein sequence :

MRSFAISTVLVMSSLLASSIIAAPTFASTAAKTEWQETRSWDAIFTQHQVELKQAKQQQVKPQKTKSQQASGVVVLWNEN
KQQGYTNSLKRANQGFLPASTFKIPNSLIALELGVVKDEHQVFKWDGKSRDIDTWNRDHNLITGMKYSVVPVYQEFARQI
GEARMSKMIASFDYGNEDISGNLDSFWLDGGIRISATEQIDFLRRLYHNKIHASERSQRIVKQAMLTEANSDYIIRAKTG
YAVRAEPSIGWWVGWVELDDNVWFFAMNMDIPDAAGLPLRQAITKEVLKLEHVIP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
bla OXA-10	CAJ77047.1	Oxacillinase	Not tested	AbaR1	Protein	1e-57	50
blaOXA-129	AET25386.1	OXA-129 beta-lactamase	Not tested	PAGI-2(C)	Protein	4e-53	48
bla OXA-129	AFG30109.1	OXA-129 beta-lactamase	Not tested	PAGI-2	Protein	4e-53	48
ACICU_00226	YP_001844885.1	Beta-lactamase class D	Not tested	AbaR20	Protein	1e-36	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Sbal117_3663	YP_006038831.1	Beta-lactamase	HM015773.1.gene6.p01	Protein	2e-96	76
Sbal117_3663	YP_006038831.1	Beta-lactamase	HQ700343.1.gene1.p01	Protein	3e-93	75
Sbal117_3663	YP_006038831.1	Beta-lactamase	JN205800.1.gene6.p01	Protein	4e-96	75
Sbal117_3663	YP_006038831.1	Beta-lactamase	AY500137.1.gene1.p01	Protein	1e-96	71
Sbal117_3663	YP_006038831.1	Beta-lactamase	AY343493.1.gene1.p01	Protein	4e-70	54
Sbal117_3663	YP_006038831.1	Beta-lactamase	U37105.2.gene2.p01	Protein	7e-58	50
Sbal117_3663	YP_006038831.1	Beta-lactamase	NC_010410.6002874.p0	Protein	7e-58	50
Sbal117_3663	YP_006038831.1	Beta-lactamase	X75562.1.gene1.p01	Protein	3e-55	49
Sbal117_3663	YP_006038831.1	Beta-lactamase	Z22590.1.gene1.p01	Protein	3e-57	49
Sbal117_3663	YP_006038831.1	Beta-lactamase	AY445080.1.gene1.p01	Protein	4e-57	49
Sbal117_3663	YP_006038831.1	Beta-lactamase	AM412777.1.gene1.p01	Protein	4e-57	49
Sbal117_3663	YP_006038831.1	Beta-lactamase	AJ854182.1.gene1.p01	Protein	2e-57	49
Sbal117_3663	YP_006038831.1	Beta-lactamase	AF231133.1.gene3.p01	Protein	8e-56	49
Sbal117_3663	YP_006038831.1	Beta-lactamase	U59183.1.gene3.p01	Protein	4e-57	49
Sbal117_3663	YP_006038831.1	Beta-lactamase	AM932669.1.gene2.p01	Protein	3e-53	48
Sbal117_3663	YP_006038831.1	Beta-lactamase	X58272.1.gene1.p01	Protein	2e-53	48
Sbal117_3663	YP_006038831.1	Beta-lactamase	AF024602.1.gene3.p01	Protein	5e-37	42
Sbal117_3663	YP_006038831.1	Beta-lactamase	AY619003.1.gene1.p01	Protein	1e-30	41
Sbal117_3663	YP_006038831.1	Beta-lactamase	EU086834.1.gene1.p01	Protein	2e-32	41
Sbal117_3663	YP_006038831.1	Beta-lactamase	EU086830.1.gene1.p01	Protein	2e-32	41
Sbal117_3663	YP_006038831.1	Beta-lactamase	AY423074.1.gene1.p01	Protein	2e-34	41