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Name : join (Sbal117_3452) Accession : YP_006038624.1 Strain : Shewanella baltica OS117 Genome accession: NC_017579 Putative virulence/resistance : Unknown Product : transposase ISSba5 protein Function : - COG functional category : - COG ID : - EC number : - Position : 3973087 - 3974264 bp Length : 1178 bp Strand : + Note : KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911 DNA sequence : ATGAGATCGACAACCAGAAAAACATTTAGTGCTGAATTCAAACTTGAAGCAGCCCAATTAGTCCTCGATAAAAACCATAG CATCATCGAAGCTGCAAAGGCGATGAACGTAGGTAAGTCCACTATGGATAAATGGGTGAGACAGTTAAAACTAGAACGCC AGGGTGGCACACCAAAAGCATCTCCGATTACCCCTGAACAAATTGAAATCCGTGAGCTGAAGAAGCAAATAGCTCGTCTT GAGGAGCACAATCTTATCCTAAAAAAGGCTACCGCTCTCTTGATGTCAGACTCGATGAACAATTTACGCTAATCAGCGCA CTCAAGCAGAGCCACTCTATTCTCACAATTTGTAATGCATTCAAAGTGCATCGAAGTAGCTATAAGTATTGGCTAAAAAG AAAAGAACATATTGATGCAGACTTTACTATTTTATGCAGTGAAGTGAAGGCTGCACATCGTATTAGTCATGGCTCTGCCG GTGCGCGAACGATAGCGCAATTAGTGACTAACAAAGGGATTGGTCTCAGTCGTTATCGAGCCCGTAATCTAATGAAAAAG CTTGGGTTATTAAGCTGTCAGCAGCCTAAGCATTCTTATAGAAAAGCGACACAAGAGCATGTTGCAATCCCCAATACGCT TAATCGACAGTTTGCAGTAACTCAACCAGATCAAGTGTGGTGTGGCGACGTGACGTATGTTTGGGTCGGTAATCGTTGGG CCTATCTAGCCGTTGTTTTAGACTTATTTTCCCGCAAACCTGTTGGATGGGCTTTGTCATTATCACCAGATCGTGAGCTG ACCTGTAAAGCTTTGAAAATGGCATTTGAGTTAAGGGGGAAGCCTGAGAATGTGATATATCACAGCGATCAAGGTTCGCA TTACACAAGCTTGAAATTCAGACAATTAATATGGCGTCTTCAGATTGAGCAAAGTATGAGTCGTCGCGGGAATTGTTGGG ATAACGCACCAATGGAGCGTTTCTTTAGAAGTTTGAAATCTGAGTGGATACCCGCCAGTGGTTATGGGAATTTTACAGAA GCAGATAAAGAGATCACAAATTACATCACTGGATATTACAGTGAGACCAGACCCCATCAATATAATGGTGGGTTAACGCC AAATGAGTCAGAACGTTTATATTGGAATGACTCTAAAACCGTGGCCAATTTTACTTGA Protein sequence : MRSTTRKTFSAEFKLEAAQLVLDKNHSIIEAAKAMNVGKSTMDKWVRQLKLERQGGTPKASPITPEQIEIRELKKQIARL EEHNLILKKGYRSLDVRLDEQFTLISALKQSHSILTICNAFKVHRSSYKYWLKRKEHIDADFTILCSEVKAAHRISHGSA GARTIAQLVTNKGIGLSRYRARNLMKKLGLLSCQQPKHSYRKATQEHVAIPNTLNRQFAVTQPDQVWCGDVTYVWVGNRW AYLAVVLDLFSRKPVGWALSLSPDRELTCKALKMAFELRGKPENVIYHSDQGSHYTSLKFRQLIWRLQIEQSMSRRGNCW DNAPMERFFRSLKSEWIPASGYGNFTEADKEITNYITGYYSETRPHQYNGGLTPNESERLYWNDSKTVANFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 8e-102 | 69 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 8e-102 | 69 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-102 | 69 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 6e-102 | 69 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-102 | 69 |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-102 | 69 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-102 | 69 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-102 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| join | YP_006038624.1 | transposase ISSba5 protein | VFG1122 | Protein | 3e-102 | 69 |
