Gene Information

Name : Sbal117_3259 (Sbal117_3259)
Accession : YP_006038438.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3748276 - 3750846 bp
Length : 2571 bp
Strand : +
Note : TIGRFAM: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, core; DNA mismatch rep

DNA sequence :
ATGAATGTAATTGATACCGATGATTTAGAAAAACATACTCCTATGATGCGTCAGTACTTGACCATGAAAGCAGAACATCA
CGACATGTTACTGTTTTATCGCATGGGTGACTTCTACGAGTTGTTTTATGACGATGCTAAACGTGCTTCTGAGCTGTTAG
GCATTTCACTCACAGCACGCGGTAAAAGTGGTGGCGATCCTATCCCCATGGCGGGACTGCCTTACCATGCTGTGGAAGGC
TATCTTGCGAAATTAGTTCAAATTGGTCAATCGGTTGCGATATGTGAACAAATTGGCGACCCAGCAACCTCTAAAGGACC
AGTTGAGCGTAAAGTGGTGCGTATCGTCACGCCTGGCACCTTGACCGACGAAGCCCTGCTGCAGGAACGCCAAGACAATC
TATTGGCAGCGGTTTATCAAGGTAAAATCGGTTTTGGTTATGCCACTCTGGATGTTTCATCCGGACGTTTTGTGATTGCC
GAGCTCGACACGCGAGAGTCATTAGAAGCTGAATTGCAACGCACTAATCCCGTTGAAATTCTCTACAGTGAAGACTTTGG
CGAACTAGGTCTACTAAACGGTTTTAAAGGTAAACGTCGTCGCCCTGAATGGGAATTTGATTACGACACTAGCATCAAGT
TACTACTGGCTCAGTTTGGCACGAAAGACTTGCATGGTTTTGGTATTGCAGATGCACGTTTATCACTGCAGGCTGCAGGT
TGCTTGATGCAATACGTCAAAGACACACAGCGCACAGCCCTGCCCCATATCAATGCCATTACCCGCTTTAATCAAACCGA
TAGCATAGTGCTCGATGCGGCAACGCGCCGAAATCTAGAACTCACTCAAAACCTTGCCGGTGGTCGCGATAATACCTTAG
CCGCAGTATTGGATAACACGGCGACGCCTATGGGCAGCCGCATTTTACAACGCTGGATCCATCAGCCGCTTCGAGATCCA
AAACACATCCAAGCACGCCAACAGGCGGTGACTGAACTACTCGATACCGCCGCCCACGAAGGTTTGCATGAACAGTTAAA
AGCACTTGGCGATATTGAACGTATCATGGCAAGACTCGCGCTGCGTACCGCTCGCCCAAGAGACTTTGCCCGTTTACGTC
AAGCGCTGGGCTTACTACCTGAATTACAAAAGAGTTTAAGCACACTGAGCGCGCCGCACACGACTCAATTACGGCAACAC
TTAGGTGAGTTCCCCGCTGAACAAGCCTTACTTGAGCGCGCGATAGTCGATAATCCTCCCATGCTTATCCGCGATGGCGG
AGTGATCCGTGAAGGCTACAACAGCGAATTAGATGAATGGCGCGGTCTTAGCGAAGGTGCGAGCGATTACTTAGTACAAC
TCGAAGCCAGAGAAAAAGAACGTACAGGTATCAACACCCTTAAAGTCGGCTATAACCGTGTACACGGCTATTACATCGAA
GTGAGTCGCTTGCAATCCTCGCAAGTGCCACTCAATTACCAACGACGTCAAACCCTTAAGAATATGGAGCGTTATATCAC
GCCCGAACTTAAGGAGTACGAAGAAAAAGTGCTCTCGAGCCAAGGTAAAGCACTGGCACTCGAAAAGCAGTTATGGGAAC
AATTATTTGATCTTATTCTGCCAAAATTACATGAATTACAAGCTTTTGCTCGAGCGGCGGCAGAACTTGATGTGTTAAGT
AACTTTGCTGAGCGCGCCGAAACCTTAGGCTACACTTGCCCAGAGCTGAGCCAAGATATCGGCGTACAGATAGAGGCTGG
TCGTCACCCAGTGGTGGAGCGTGTGAGTCAAACACCGTTTATCGCTAACCCAGTCACCTTGCACAATCAAAGACGTATGT
TGATTGTCACCGGACCTAACATGGGCGGTAAATCGACCTATATGCGCCAAGTCGCCTTGATCACGCTGATGGCCCACATT
GGCTGTTTTGTGCCAGCAGGTCGCGCACTGATAGGCCCTATCGATCGTATCTTTACCCGTATTGGCGCCTCTGACGATCT
GGCCTCTGGCCGTTCAACCTTTATGGTCGAAATGACAGAAACCGCCAACATTCTACACAACGCCACCGCCAGTAGCTTAG
TGTTAATGGATGAAATCGGCCGCGGCACATCCACCTATGATGGTTTATCGCTCGCTTGGTCGGCAGCAGAGTATTTAGCC
CAGCAAGTCGGCGCTATGACCCTATTCGCCACCCATTATTTTGAACTAACTCAGTTACCTGAATTAATGGCTGGTGTTTA
CAATGTGCACCTCGATGCCATTGAACACGACGATACCATCGCCTTTATGCATACAGTGCAAGAAGGCGCCGCCAGTAAAA
GCTACGGCTTACAAGTTGCGGCGCTTGCCGGCGTACCAAACAAAGTGATTAAAGCCGCTAAACATAAGTTGCAGCAATTG
GAGAGTCGCGATCATCAAGCTGAAGGCACGAGGACGCCTATTCAAAGCTTACTCGCGTTACCTGAACCTGTTGAGAATCC
AGCGCTAACGAAGTTAAGTAGCATTAATCCCGATAACTTAACGCCAAAACAAGCACTTGATTTGCTCTATGAGCTGAAAC
GTCTGAGCTAA

Protein sequence :
MNVIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAGLPYHAVEG
YLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGTLTDEALLQERQDNLLAAVYQGKIGFGYATLDVSSGRFVIA
ELDTRESLEAELQRTNPVEILYSEDFGELGLLNGFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGIADARLSLQAAG
CLMQYVKDTQRTALPHINAITRFNQTDSIVLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRILQRWIHQPLRDP
KHIQARQQAVTELLDTAAHEGLHEQLKALGDIERIMARLALRTARPRDFARLRQALGLLPELQKSLSTLSAPHTTQLRQH
LGEFPAEQALLERAIVDNPPMLIRDGGVIREGYNSELDEWRGLSEGASDYLVQLEAREKERTGINTLKVGYNRVHGYYIE
VSRLQSSQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLILPKLHELQAFARAAAELDVLS
NFAERAETLGYTCPELSQDIGVQIEAGRHPVVERVSQTPFIANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHI
GCFVPAGRALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
QQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHDDTIAFMHTVQEGAASKSYGLQVAALAGVPNKVIKAAKHKLQQL
ESRDHQAEGTRTPIQSLLALPEPVENPALTKLSSINPDNLTPKQALDLLYELKRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_3259 YP_006038438.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 68