Gene Information

Name : Sbal117_3054 (Sbal117_3054)
Accession : YP_006038236.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3526893 - 3527639 bp
Length : 747 bp
Strand : -
Note : KEGG: shw:Sputw3181_1437 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence :
ATGACAACACGTATCCTCGCGTTAGTTGGCTTAGTTATTCTGTTATGCATGCCGTCTGCATGGGCTGCCGATGGTGTTTT
GCCTGCGGTTACCGTAACAACAGGACCTGACGGTTCAACAGAATACTCGGTCACAATGCAGATTTTACTGTTGATGACAT
CGCTGAGTTTTTTACCTGCGATGCTCATTATGTTGACCTCTTTCACGCGGATCATCATCGTTCTGTCAATATTACGTCAA
GCCATTGGGTTGCAACAGACGCCGTCTAATCAAGTCTTAATTGGCATGAGTTTATTCATGACCTTCTTTATTATGGCGCC
GGTGTTTGACCGGATTTATGACGAAGGGGTTAAGCCTTACATTGAAGAGCAGTTAACCTTGCAGCAAGCGTTTGAAAAAG
GCAAAGAGCCACTCAAAGGTTTTATGTTGGGGCAAGTCAGGACCACTGACTTAAAAACTTTTATCGAAATTTCAGGCTAT
AAGAACATTAAGTCGCCCGAAGAAGCTCCGATGAGTGTGCTGATCCCCGCCTTTATTACCAGCGAGTTGAAAACAGCTTT
TCAAATTGGCTTTATGTTGTTCGTGCCATTTTTAGTGTTAGATCTTGTGGTGGCCAGTATCTTAATGGCCATGGGTATGA
TGATGTTATCTCCTATGATAGTGTCGCTACCGTTTAAGATTATGCTGTTTGTGCTCGTCGATGGTTGGAGCTTAGTCCTT
GGGACATTAGCGAATAGTTTCGGGTAG

Protein sequence :
MTTRILALVGLVILLCMPSAWAADGVLPAVTVTTGPDGSTEYSVTMQILLLMTSLSFLPAMLIMLTSFTRIIIVLSILRQ
AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDRIYDEGVKPYIEEQLTLQQAFEKGKEPLKGFMLGQVRTTDLKTFIEISGY
KNIKSPEEAPMSVLIPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWSLVL
GTLANSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-13 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-13 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-13 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 2e-15 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-16 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 9e-15 41
escR AAC31528.1 L0049 Virulence LEE Protein 6e-15 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 6e-15 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 4e-14 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 9e-15 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_3054 YP_006038236.1 flagellar biosynthetic protein FliP VFG1259 Protein 1e-56 65
Sbal117_3054 YP_006038236.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-51 63
Sbal117_3054 YP_006038236.1 flagellar biosynthetic protein FliP VFG2494 Protein 7e-53 61
Sbal117_3054 YP_006038236.1 flagellar biosynthetic protein FliP VFG2338 Protein 5e-47 53
Sbal117_3054 YP_006038236.1 flagellar biosynthetic protein FliP VFG0827 Protein 4e-15 41