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Name : Sbal117_2872 (Sbal117_2872) Accession : YP_006038058.1 Strain : Shewanella baltica OS117 Genome accession: NC_017579 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 3306816 - 3308933 bp Length : 2118 bp Strand : - Note : SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: shw:Sputw3181_1573 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Topri DNA sequence : ATGATCCTCTATATCGCTGAAAAACCTAGCCTAGGGCGGGCCATTGCCGATGTATTGCCTAAACCCCATAAAAAAGGCGA TGGATTTATTGAAGCCGCCAATGGCGATTGCGTGTCTTGGTGTGTCGGTCACTTGCTCGAACAAGCAGAACCTGATGCCT ATAATCCCGAATTTAAGTCGTGGAAATTCGAGCACTTGCCAATAGTGCCGGACAAGTGGCAACTAAAACCTAAGGCCGCA ACTCGCAGCCAACTCACAGTGCTGAAACGATTAGTCAAACAAGCTAACACGCTGGTTAATGCAGGCGATCCCGATCGTGA AGGGCAATTACTCGTGGATGAAGTGATTGCCTATCTTGGCGTGACGGGTGATAAATTACATCAAACTCAGCGTTTACTGA TCAGCGACTTAAACCCACAAGCCGTAAAACGGGCGCTAACGCAGCTACGCAGTAATCGCGAGTTTATTCCTTTGTCCACA TCGGCCTTAGCCCGTAGCCGCGCCGATTGGCTCTACGGCATGAATATGACCCGCGCGTACACTATCCAAGGTAAAAAGGT TGGTTATCAAGGCGTATTGTCCGTCGGGCGAGTGCAAACGCCTTTACTCGGGCTAGTGGTGCGCCGTGATGAAGAGATTG CTAATTTTCAATCTAAACCTTTCTATGAAGTGCTAGCGCATTTGGCGACCGAAAAGCAGGAAACCTTCAGTGCTAAGTGG CAACCCAGCGAAGCTTGTCAGCCCTATATGGACGAAGAAGGGCGAGTATTAGCCAGAGGATTAGCGCAAAATGTGGTGAG TCGCATCAGTGATAAACCTGCCTTAGTGACTCAATTAGTGGCTAAGGACAAGAAACAGAATCCGCCTTTGCCCTACAGCT TATCCGCGTTGCAAATTGATGCGGCAAAACGGTTTGGCATGAGTGCTAAGGATGTGCTCGATACCTGCCAGAGTTTGTAT GAGCGCCATAAACTCATTACCTATCCCCGCTCTGACAGCCGTTATTTACCCGTCGAGCAACATAGCCTAGCGCCGTCGGT ACTTAAGGCGATTAGCGGTGGTGCCGCTGAGTTACTGCAAGGCGCCGATGCCCCCGATCCACGGCTAAAATCCAAGGCAT GGGATGATAAAAAAGTGGATGCCCACCACGCCATCGTTCCTACCGAGAAAACGGCTAACTTATCCAGCTTAAGTCAGCGT GAGAGGCAGTTATATCTTCATGTTGCCCGCCAGTACTTAGCCCAGTTTTATCCGGCCTATTGTTACAGTGAAACCACAGT ACAAGTGACAATTGAGGGCGGCTTATTTAATACCAAGGCGCGTCAGGATAAATCTCTTGGCTGGAAGCAGCTCTTTGCCC GCCAAGAGCCAAATGGCAGTAAGGCGAGTGGCAACAAGTCGACGGAGGAAAATGCGGGTAAGGATGATGAGGAGAATGAC GAGTTTATCGGCCAATTACCGCCTCTGAAATTAGGGCTGGCTTTGCATTGTACTCGAGGCGAGTTACTTGAGAAAAATAC TCAGCCGCCAAAGGCCTTTACCGATGCCACTTTACTTGGTGCTATGACGGGGATTAGCCGTTACGTAACCGACCCTGAGA TCCGTAAAATTCTTAAAGAAACCGATGGCTTAGGTACTGAAGCCACCCGTGCAGGCATTATTGAACTACTGTTTAAACGC GGTTTTTTACAACGCTTAGGTAAATCTATCGTTTCGACGGATGTGGGTAAGGGATTAATTAACAGCTTACCCGCGAGTGC AACAACGCCGGACATGACAGCCCTTTGGGAAGCAAGCTTGAACGGTATTTGTCATAAAGAAACCTCCTATCAAGCCTTTA TGCAACCGTTGCTAGGCACCTTGTCCACGCTTATCCAAAATGCAGGAGCACAACTGCCCACCGCGCTTAATGGTTTAAAA GGCCAAGGTTATCGTAAAACGGCTGGGAATAAATCTGGTTATCGCAAGTCGCCTTACCGTAAAGCCTCTAGCTCTGCAAA ACGCACTGGCACGGCAAGTACCGCTAAAACAAGTACAACGACAAGTAGCAGTGCGAAAAAGTCGAGTGCGAGTTCAGGGA CTCGGAGTCGAACACGCAAAGTGGCTGCTGAGGTTTGA Protein sequence : MILYIAEKPSLGRAIADVLPKPHKKGDGFIEAANGDCVSWCVGHLLEQAEPDAYNPEFKSWKFEHLPIVPDKWQLKPKAA TRSQLTVLKRLVKQANTLVNAGDPDREGQLLVDEVIAYLGVTGDKLHQTQRLLISDLNPQAVKRALTQLRSNREFIPLST SALARSRADWLYGMNMTRAYTIQGKKVGYQGVLSVGRVQTPLLGLVVRRDEEIANFQSKPFYEVLAHLATEKQETFSAKW QPSEACQPYMDEEGRVLARGLAQNVVSRISDKPALVTQLVAKDKKQNPPLPYSLSALQIDAAKRFGMSAKDVLDTCQSLY ERHKLITYPRSDSRYLPVEQHSLAPSVLKAISGGAAELLQGADAPDPRLKSKAWDDKKVDAHHAIVPTEKTANLSSLSQR ERQLYLHVARQYLAQFYPAYCYSETTVQVTIEGGLFNTKARQDKSLGWKQLFARQEPNGSKASGNKSTEENAGKDDEEND EFIGQLPPLKLGLALHCTRGELLEKNTQPPKAFTDATLLGAMTGISRYVTDPEIRKILKETDGLGTEATRAGIIELLFKR GFLQRLGKSIVSTDVGKGLINSLPASATTPDMTALWEASLNGICHKETSYQAFMQPLLGTLSTLIQNAGAQLPTALNGLK GQGYRKTAGNKSGYRKSPYRKASSSAKRTGTASTAKTSTTTSSSAKKSSASSGTRSRTRKVAAEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-101 | 41 |
