Gene Information

Name : Sbal117_2507 (Sbal117_2507)
Accession : YP_006037709.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 2861907 - 2862644 bp
Length : 738 bp
Strand : +
Note : PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: son:SO_2478 3-deoxy-manno-octulosonate cytidylyltransferase

DNA sequence :
ATGAATGTGACTCTGTTAATCCCGGCTCGTTACGGTTCAAGCCGCTTCCCGGGCAAACCCTTAGCCCCGATTAACGGCAA
GCCAATGATCCAACACGTGTATGAACGCGCGTCGTTAGCCAAAGGCCTCACCAATATTTATGTCGCTACCGATGATGACC
GCATTAAAGCGGCCGTTGAAGGTTTTGGCGGCAAAGTGGTCATGACCAGCCCAGAAGCGGCATCGGGTACAGATCGTATC
AATGATGCGATAAACCAACTGGGACTGAAAGATGACGACTTAGTGATCAACCTACAGGGCGATCAACCCCTTATTGACCC
CACCTCTATCGAGCAAGTCATCAGCCTCTTCGAGCGTCACCCAGGTGAGTTTGAAATGGCCACCTTAGGCTTTGAAATCG
TCAATAAAGCCGAGCTTGACGATCCTATGCATGTGAAGATGGTGTTCGATAACAACAACTATGCCTTGTATTTCTCTCGT
TCGCGTATTCCTTTTGGCCGCGACACCCAAGATTACCCCGTTTATAAGCACTTAGGTGTGTATGCTTATACCCGAAAATT
CGTCCAAGCCTTCGCCGCTCTGCCATTAGGACGTCTAGAAGATCTGGAAAAACTCGAGCAATTGCGTGCATTAGAATACG
GTCATAAAATCAAAATCGCCATTAGCGCCTTTGATTCTATTGAAGTTGATACGCCAGAAGACATTCGTAAATGTGAGCAA
CGTTTAGCGGTTGATTAA

Protein sequence :
MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRI
NDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSR
SRIPFGRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRKCEQ
RLAVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-42 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 6e-42 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-42 42