Name : Sbal117_2092 (Sbal117_2092) Accession : YP_006037323.1 Strain : Shewanella baltica OS117 Genome accession: NC_017579 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : - COG ID : - EC number : - Position : 2388484 - 2389284 bp Length : 801 bp Strand : + Note : KEGG: svo:SVI_2228 type III secretion system apparatus protein, SpaR/YscT family; TIGRFAM: Type III secretion protein SpaR/YscT; PFAM: Type III secretion system inner membrane R protein DNA sequence : ATGACAACTCTGCTGCCCAATCTGTTAACGGCACAACTTCCTGTATTGGCACTCTGTATGATGCGACCATTAGGCATGAT GCTGTTATTGCCCCTATTCAAAGGCGGGGCTATGGGTAGCGCATTAATCCGTAATAGCCTGATTTTAATGTTTGCTTTAC CTACTGTGCTGGCAATGGATGAAATGCAGCCGATACTGCAACAGGCCGACACTTGGATGCTCATCAGCCTATTTGGCAAA GAAATGATTGTAGGCGTGTTACTTGGTTTTTGCGCCGCTATTCCCTTTTGGGCAATAGATATGGCGGGATTTGTGATTGA CACCATGCGGGGAGCATCCATGTCGACTGTGCTTAATCCCTTGATGGGACTGCAATCATCGATTTATGGCATGCTGTTTA CTCAAGTTCTGACAGTGCTGTTTTTAGTCTCGGGTGGTTTTAATTTTCTGTTAACCGCACTCTATCAATCCTATCAACAA CTTCCCCCAGGATTTAATTTAACGCTAGCCCAACCCTTGATGGTGTTTATAGCCCATGAGTGGCAATTGATGTGCCAACT TTGCCTCAGTTTTGCCATGCCCGCCATGGTGATTATGATCTTAGTCGATGTCGCCTTAGGGCTAGTAAACCGCTCGGCGC AGCAGTTAAATGTGTTCTTTTTGTCTATGCCCATTAAAAGCGCTTTGGTCTTACTGTTATTAATCTACAGCCTACAGTTT GCCTTGTCCCATTACCTGCAGACCATTTCTGGGGTAGAGCAGCACGTAGATATTTTGTTTGGACTCTTAGCAGGGCACTA G Protein sequence : MTTLLPNLLTAQLPVLALCMMRPLGMMLLLPLFKGGAMGSALIRNSLILMFALPTVLAMDEMQPILQQADTWMLISLFGK EMIVGVLLGFCAAIPFWAIDMAGFVIDTMRGASMSTVLNPLMGLQSSIYGMLFTQVLTVLFLVSGGFNFLLTALYQSYQQ LPPGFNLTLAQPLMVFIAHEWQLMCQLCLSFAMPAMVIMILVDVALGLVNRSAQQLNVFFLSMPIKSALVLLLLIYSLQF ALSHYLQTISGVEQHVDILFGLLAGH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 1e-43 | 54 |
ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 6e-40 | 50 |
ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 9e-39 | 49 |
ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-39 | 49 |
ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 1e-39 | 49 |
ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 7e-39 | 49 |
lscT | AAO18038.1 | LscT | Virulence | TTSS locus | Protein | 1e-18 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Sbal117_2092 | YP_006037323.1 | type III secretion protein SpaR/YscT/HrcT | VFG0521 | Protein | 4e-39 | 49 |