Gene Information

Name : Sbal117_2091 (Sbal117_2091)
Accession : YP_006037322.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : type III secretion protein, HrpO family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2388212 - 2388481 bp
Length : 270 bp
Strand : +
Note : KEGG: svo:SVI_2229 type III secretion system EscS protein; TIGRFAM: Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3

DNA sequence : 
ATGAGCGAAACTATCATTGTACATTTCACCTCAGAACTACTGTGGATGGTGTTACTGCTGTCGCTACCTGTCGTTATCGT
GGCTTCAGTTGTCGGAGTTTTGGTTAGTCTTATTCAAGCCCTGACCCAAATCCAAGACCAAACACTGCAGTTTCTAATCA
AACTCATCGCCGTGTGCGTGACACTCGTGGTCTGTTATCACTGGATGGGCAGCTCACTGTTGAATTACGCCAGCATGGCT
TTCGATCAAATTAGCCAAATGGGGGATTAG

Protein sequence : 
MSETIIVHFTSELLWMVLLLSLPVVIVASVVGVLVSLIQALTQIQDQTLQFLIKLIAVCVTLVVCYHWMGSSLLNYASMA
FDQISQMGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 5e-08 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_2091 YP_006037322.1 type III secretion protein, HrpO family VFG0395 Protein 9e-08 60
Sbal117_2091 YP_006037322.1 type III secretion protein, HrpO family VFG0187 Protein 0.27 52