Gene Information

Name : Sbal117_0196 (Sbal117_0196)
Accession : YP_006035493.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : H+transporting two-sector ATPase alpha/beta subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 225521 - 226783 bp
Length : 1263 bp
Strand : +
Note : KEGG: vpa:VPA1338 putative ATPase YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGATCAAACATTTTTTTAAGGTTAAAGAATCTTATCAAGATACAGTAACTTGTCATGTCAGTATAAATACTTTTGTGGG
GCAGGAGTGTTTCATTATCACAGTCGGTAATGAGCGCATTCGTGGTGAGATAATGAAAATTACTGGTAAAAGAGTCGAAA
TTAAGTTGCTTCAGCCAGGGGCGATTCAACGGGGGAGTAAAGTGGAAATTACCCCGCGGCGCTTCTGTTTCCCACTGAAT
GAAACCGCTCTTATTGGTAAGGTCATTAATTGCTATGGCGAGTCATTGTATGGTGAACAATATTTGGGCTGTGAGGGCGA
TTACTATGATTTACCCATTATCGATAAGCCTATACCGCTTAATATTCGTGCACCCATCGACACTGTGTTTCCGACAAAAA
TTAAAATTATTGATGGCTTATTCACTATTGGAGTTGGGCAGCGTTTAGGCCTATTTGCCCCCGCTGGGGCAGGCAAAACT
ACCACGGTTTCGATCATGGCAAATAACATGGATGCCGATGTGGTGATTTTCGCCATGATTGGCGAGCGCGCAAGGGAGGT
GGTTGAGTTTTTGGAGGGTGAGATTGGCCCTGCTGTGATTCAAAAATCGATCACTATAGTGTCTACATCCGAAGCAAACC
CGTTAGAAAAAGTGAGATCGGGTTTAGTCGCAGTGTCCATTGCGAGGCATTACATGGCTCAGGGCAAGAAAGTGGTGCTC
TATTTCGATTCATTGACACGTTTTGCACGTGCGCAAGCCATGTTAGATGGCACTCCCATTGAGGGCGGGATCCCCATTGG
AGTGTCTTTAGCACTGTCACGACTGGTAGAGAATTGTGGTAACTCTATTCATGGTTCAGTGACAGGGATTTTTACAGTAC
TGATTGAAAAAGAAATTGATGAAGACCCTATTGCACATGAGGTTAAATCATTGATTGATGGACATTTGGTCTACTCAACG
ACAATTGCCTCAACTGGGCGTTACCCCGCCATTGATGTTCTAAAGAGCAAGAGTCGTTTGCAAAATAAAGTTCAGGACTC
TCAATATGTGAGTCTTTCTGAAAAGTTCAAAGATATGGTGTATCGCTATTTTAATGTTGAACTGCTAATCCGTGTCGGTG
AGTACGAGAAAGGTAACGATTTAGCGACCGACGAAGCGATAGATCGCTTCCCATATATCATGGAATTTTTGAAGCAAGGT
TATGATGGGGTTGAGTATGAAGAAACCCTCCAAGCAATGGACCGAATTTGGTCAACTTATTGA

Protein sequence :
MIKHFFKVKESYQDTVTCHVSINTFVGQECFIITVGNERIRGEIMKITGKRVEIKLLQPGAIQRGSKVEITPRRFCFPLN
ETALIGKVINCYGESLYGEQYLGCEGDYYDLPIIDKPIPLNIRAPIDTVFPTKIKIIDGLFTIGVGQRLGLFAPAGAGKT
TTVSIMANNMDADVVIFAMIGERAREVVEFLEGEIGPAVIQKSITIVSTSEANPLEKVRSGLVAVSIARHYMAQGKKVVL
YFDSLTRFARAQAMLDGTPIEGGIPIGVSLALSRLVENCGNSIHGSVTGIFTVLIEKEIDEDPIAHEVKSLIDGHLVYST
TIASTGRYPAIDVLKSKSRLQNKVQDSQYVSLSEKFKDMVYRYFNVELLIRVGEYEKGNDLATDEAIDRFPYIMEFLKQG
YDGVEYEETLQAMDRIWSTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-53 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-53 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 5e-54 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-54 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-49 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-49 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-49 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-54 41