Gene Information

Name : Sbal117_1750 (Sbal117_1750)
Accession : YP_006036995.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Unknown
Product : transposase ISShes5 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2017931 - 2019313 bp
Length : 1383 bp
Strand : +
Note : PFAM: Transposase, IS4-like; KEGG: son:SO_A0136 ISSod3, transposase

DNA sequence :
GTGCAAGTGTTAACTATCTTACATCAATCTCTCTATCAACATTGTCCAGAAATCCATCAAAAGCGACTCAATACCCTCAT
GGTTACTTGCCGAGCACTTATCAATGCTGATTGCCTCACCCTAACGCATTTAGGGCGGCACATTGATGGCACCAGCACTC
ATACTAAGCACTCAATAAAACGCATGGATAGATTGTTGGGCAATCCGCATCTTCACCATGAAAGAATGGCTGTTTATCAG
TGGCATGCAAAATGGCTGCTAACAGCACATACGATGCCGACAATATTGGTGGATTGGTCAGATATGCGTGAAGGTCGTGA
GCTTATTGCGCTACGTGCCTCTATCGCTATCAAAGGTCGCTCTATCACGCTCTACGAACGAACATTTCCGTTAGTGCTGC
AAGGCACTCAAACCGCCCATAATCAGTTTCTTAATGAACTCAGAAAAGTGTTACCTGACAACATCACCCCGCTGATAGTC
ACTGACGCGGGCTTTCGTAATCCATGGTTTCGAAAAGTTGAGCAGCTCGGTTGGTATTGGCTGGGTCGCGTTAGAGGATT
GAGTGTCTATCGGCCGCATCCTTTCGGTCGCCAATTTTCACTAAAAGCGCTTTATCCCCAAGCCCGTCGTCGCGCAAAAC
ATGTTGGGCGGGTGGCGTTATCGGTAAAGAAACCTTTGTTATGTGAGATGGTATTGTTCAGGGCCCCAAGTAAAGGCAGA
AAAGGTCAGCGAAGTACGACAACAGACTGTCACCATACGGCACAATGGACGTATGAGTTGACCGCCAAAGAGCCTTGGGC
GCTGGTGACTAACTTGACCATGAAAGCCATGTCGCCTCAAAAACTGGTCAATATCTACCAAAAGCGGATGCAAATGGAAG
AAACCTTTAGAGATTTAAAAAGTCCCGCTTATGGCTTTGGTTTACGTCATAGCAGAACACGTTATGCGGCGAGGATGGAC
ATACTGCTATTGATAGCGTTATTGGTGCAACTGGCATTTTGGTGGATAGGATTATACGGGGAAACACAGCAATTACAGCG
GCACTTCCAAGCAAACACGGTAAAGAAAAGGAATGTGCTATCAACAATCAGGATGGGCAAAGAACTGCTGCGTCGACGGC
ATGATTATCCCATATCAGCAGATGATTTGCTTTGTGCTGCGAAGAAACTAGCTGAACTCTCATTAACTCATGGTTGTTGG
GGCTATATAGCGCGTCAATTAGCTTGGCCGATCCAGCGACAATTAACTTGGCCGGTTGAGACTCGGTTTAATTTAGTTTG
TTTTGGGCTTCTTTTCGCCTGTAGCTTTCTCCTTTGCATTGCAAAATTTTCGCGTGGTGGATCAGCCTATCGATTGCAGC
TACGGTCATCACTGTGTCACTGA

Protein sequence :
MQVLTILHQSLYQHCPEIHQKRLNTLMVTCRALINADCLTLTHLGRHIDGTSTHTKHSIKRMDRLLGNPHLHHERMAVYQ
WHAKWLLTAHTMPTILVDWSDMREGRELIALRASIAIKGRSITLYERTFPLVLQGTQTAHNQFLNELRKVLPDNITPLIV
TDAGFRNPWFRKVEQLGWYWLGRVRGLSVYRPHPFGRQFSLKALYPQARRRAKHVGRVALSVKKPLLCEMVLFRAPSKGR
KGQRSTTTDCHHTAQWTYELTAKEPWALVTNLTMKAMSPQKLVNIYQKRMQMEETFRDLKSPAYGFGLRHSRTRYAARMD
ILLLIALLVQLAFWWIGLYGETQQLQRHFQANTVKKRNVLSTIRMGKELLRRRHDYPISADDLLCAAKKLAELSLTHGCW
GYIARQLAWPIQRQLTWPVETRFNLVCFGLLFACSFLLCIAKFSRGGSAYRLQLRSSLCH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AEA34664.1 IS10 transposase Not tested Not named Protein 9e-94 55
IS10 CAI43894.1 transposase for IS10 Not tested LEE Protein 5e-94 55
SF2983 NP_708757.1 iso-IS10R ORF Not tested SHI-1 Protein 6e-94 55
tnp AEA34674.1 IS10 transposase Not tested Not named Protein 1e-93 55
IS1999 CAJ77042.1 Insertion sequence Not tested AbaR1 Protein 1e-91 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_1750 YP_006036995.1 transposase ISShes5 protein VFG0647 Protein 2e-94 55