Gene Information

Name : Sbal117_1428 (Sbal117_1428)
Accession : YP_006036683.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.8
Position : 1608457 - 1609920 bp
Length : 1464 bp
Strand : +
Note : TIGRFAM: Betaine aldehyde dehydrogenase; KEGG: sdn:Sden_0714 betaine aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase

DNA sequence :
ATGTCAGTAGAAGTACAGTACAACTTTATTGCGGGTCAGTTGCTCGCTAACGATAGCGGCGAAACCTTCGACGTCGTCAA
TCCTGCCACAGGGCAATTGGCGTATCGAGTGCAAGTGGCCGATGAAAAAATTCAGCAAGCGGCCATCGAGAGCGCCAAAA
AAGGCTTTGCGATTTGGTCTGCCATGAGTGCTACTGAACGCAGCCGTATTCTGTTAAACGCGGTCGCATTATTGCGCTCT
CGTAATGATGAACTCGCGGCAATCGAAGTGCGCGACACAGGTAAACCTTGGCAAGAAGCCTCAGTGGTTGATGTGGTCAC
AGGCGCAGATGCTATCGAGTTTTTCGCCCATATTGCCCCAGGGCTTGAAGGCGCGCAGCAGCAAGTCGGTGGGGATTTTT
ATTACACCCGCCGTGAGCCTTTAGGCATTTGTGCTGGTATTGGCGCCTGGAATTACCCATTACAAATCGCCTGTTGGAAG
GCCGCTCCTGCATTAGCCAGCGGCAATGTGATGATTTTTAAACCTTCGGAAGAAACGCCGCTTGGCGCACTGAAATTAGC
GCAACTCTTAAGTGAAGCGGGTTTGCCCGATGGCGTATTTAACGTCGTGATGGGCGATGGCAAGGTTGGCGCTTGGTTAA
CGGGACATCCGGATATTGCCAAAGTGTCTTTCACTGGTGAAGTCGGTACTGGCAAAAAAGTCATGGCCGCGGCGGCAAGT
TCATTAAAAGACGTCACTATGGAACTCGGTGGAAAATCACCGCTTATCGTGTTTGACGATGCCGATATCGACAATGCGGT
TTCAGGTGCCATGCTCGGTAACTTCTACACCCAAGGTGAAGTCTGCACCAATGGGACACGAGTGTTTGTCCATGAGTCGG
TTTATCAAGACTTTATTGAGAAGCTGCTTGCCCGTACTCAAGCCAATATTGTGGTGGGCGATCCTATGGCGCCAGAGACT
AACTTTGGCGCGTTGATTTCCAAAGATCATCAGCAAAAAGTGCTCGATTATATTCAGCAAGGTATCGATGACGGCGCAAC
TCTGCTCACTGGTGGCACAGCGTTAACGCCTGAAAATGCTCCCAATGGTTACTTTGTCGCCCCAACCATTTTCACCGATT
GCACCGACGAGATGCGTATCTGTAAAGAGGAAATCTTTGGCCCTGTGATGTCGGTACTCACCTTTAAAGATGAAGCCGAA
GTGATTGCTCGGGCAAATAATACCGCCATGGGCTTAGCTGCTGGGGTGTTCACCCAAGATATCAGCCGTGCCCATCGGGT
TATTCATCAGTTACAAGCGGGTATTTGTTGGATCAATGCCTATGGTGCATCGCCAGCAGAAATGCCGGTAGGTGGATATA
AGTTGTCGGGTATTGGCCGTGAAAACGGTAGCGAGACACTCAAGCATTACACCCAAGTTAAAGCCGTTTACGTGGGTCTA
CAGCCCTTAGAAAGCCCATTTTAA

Protein sequence :
MSVEVQYNFIAGQLLANDSGETFDVVNPATGQLAYRVQVADEKIQQAAIESAKKGFAIWSAMSATERSRILLNAVALLRS
RNDELAAIEVRDTGKPWQEASVVDVVTGADAIEFFAHIAPGLEGAQQQVGGDFYYTRREPLGICAGIGAWNYPLQIACWK
AAPALASGNVMIFKPSEETPLGALKLAQLLSEAGLPDGVFNVVMGDGKVGAWLTGHPDIAKVSFTGEVGTGKKVMAAAAS
SLKDVTMELGGKSPLIVFDDADIDNAVSGAMLGNFYTQGEVCTNGTRVFVHESVYQDFIEKLLARTQANIVVGDPMAPET
NFGALISKDHQQKVLDYIQQGIDDGATLLTGGTALTPENAPNGYFVAPTIFTDCTDEMRICKEEIFGPVMSVLTFKDEAE
VIARANNTAMGLAAGVFTQDISRAHRVIHQLQAGICWINAYGASPAEMPVGGYKLSGIGRENGSETLKHYTQVKAVYVGL
QPLESPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-74 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-74 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-74 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_1428 YP_006036683.1 betaine aldehyde dehydrogenase VFG0082 Protein 1e-72 41