|
Name : Sbal117_4782 (Sbal117_4782) Accession : YP_006035239.1 Strain : Genome accession: NC_017578 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 6752 - 8875 bp Length : 2124 bp Strand : - Note : SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: hna:Hneap_1612 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim do DNA sequence : ATGAGACTCTTTTTATGCGAAAAACCGTCACAGGCAAAAGATATTGCGAGTGTCCTTGGTTGTAAGCGTGGAGATGGTGT TTTTACTGGTGACGGTATTGCGGTGACGTTTTGCGTTGGTCATGTTTTACAACAAGCAGAACCTGAAAACTATAACCCTG ATTTTGAGACGTGGAATATCGTTGATTTACCCATTATTCCAACAGCTTGGAAAATGTTAGTCAGTCCAAAAACGAAAGCG CAATTTGCGATTGTAAAAAAGCAATTGGCCAAGGCCACTGAGGTTATTATTGCAACGGATGCAGACCGCGAAGGTGAAGT TATCGCCCGTGAGGTGCTTGAATACGTTAACTATAAAGGGCCCATTCAACGGTTGTGGCTAAGTGCGTTGGATGACGCCA GCATTAAGAAAGCGTTGGCGTCTTTGCGACCTAACCATGAAACTGCCAAGCTTTACGATGCAGGGTTAGGCCGAAGTCGG GGAGACTGGCTTATTGGAATGAATATGACGCGATTATGCACCTTACTGAGCCGTGAATACGGTTATCAAGGTGCATTCTC AGTCGGAAGAGTGCAGACGCCAACATTACGGCTTGTGGTCGATAGAGATAGCCAAGTTGAGCAGTTTGAACCACAGTCGT ATTACGATATCACTGGCTTATTTAATGCAACGATCCCGTTTAAAGCCAAATGGCAAGTGCCTGATAATCTTGGGGATGAG CAAGGCCGCTGCTTACAAGTGACGACTGTTGATCATGTCTTGTCTCAATGTCGTGACCAACCTGGTACAGTCACGCAATT CGATACCAAGCGGCAAAAATCTAAACACCCACCGTTATTTTTCTTAGGTTCTTTGCAAAAGGCCATGTCTGCTAAGTTTG GCTATGGCGCTAAAGAAGTACTCGATATTGCGCAATCTTTATATGAGAAATATAAGGTCACGACTTACCCCCGAACAGAT TGTCCTTATTTGCCCTTATCTCAGAAGGAGGAGGTTGGCTCAATCCTCGATAAACTCAAGGTTGTGCCAGCATTTGCTGC ATGGTGTAGCGCTGCAGATGTAAATGAAACAAGTGCCTGTTGGAATGATAAGAAAATTACGGCTCACCACGGGATTATTC CATTACCGGTGACACCGAAATTGCATGAAATGAACGAAAAGGAGCTGAATCTTTATCATGCTATTGTGCAGCGATATCTC GCTCAGTTTTACCCAGTAGCGGAAGACGATGCCACAACAATTGAACTGATGGTTGGAAGCCAAAGTGTTAAAGCGACGGG CAAGGTTGAGCGAGTGAAAGGCTGGCGCTTGGTGACAGGTAAAGACAGTGAGGATGAAACTACCGATGACAGTGCTAATT TGCCGCTGTTGAGCATCGGACAAACCTTAACAGCACAGTTTCAGCGAGAAGATAAGCGAACAAAGCCACCTGGACGTTTT ACGGAAGGAACGCTGATTGATGCAATGTCAAATATCGCTAAATTTGAAAGTGATCCCAAACTCAAATCCATTTTAAAAGA AACCTCAGGCATTGGTACTGAAGCAACCCGAGCAAACATTATCGATACGCTCAAAGCGCGGGGATTTGTCACTGTTACGG GGAAGCAGTTGATAAGCTCAGAAGCCGGAAGATCACTCATCGATGCGTTGCCAGATGTGCTCACCAGACCCGCTATGACA GCATTGTGGGAACAAGCACTCGATGAGATTGCATTGGGTAATGGTTCACTGGATGATTTCATGGCAAGGCAAAGTACATT TATCACGCAATTAGTCTCTATGTTCAAACAAGGGCAATACACATTAAAGCTGCCAAAGGTTTTGGCTGTGACACTCCCGT GCCCAGTATGTCAAAAATCGATGAAACAATTGTCGGGGAAAAACGGTAAGTTCTGGGTATGCGAGGACAAAGAACAATGT GGTCTATTGCTTAATGATGAGCGCGGGAAATTGCCTAAAACAACACCTTGTACATGTAAGAAAGGGGTGCTTGTTAGAAA AAAAGCCAAAACGAAAGGTAAGTTCTGGTGGGGATGCTCGGCATATCAATCAGGTTGCCAGCGACGATTGTTTGATAATG AGGGTAAGCCTGGTAAGGAGATGGAGAGCAATAACCAAACATAG Protein sequence : MRLFLCEKPSQAKDIASVLGCKRGDGVFTGDGIAVTFCVGHVLQQAEPENYNPDFETWNIVDLPIIPTAWKMLVSPKTKA QFAIVKKQLAKATEVIIATDADREGEVIAREVLEYVNYKGPIQRLWLSALDDASIKKALASLRPNHETAKLYDAGLGRSR GDWLIGMNMTRLCTLLSREYGYQGAFSVGRVQTPTLRLVVDRDSQVEQFEPQSYYDITGLFNATIPFKAKWQVPDNLGDE QGRCLQVTTVDHVLSQCRDQPGTVTQFDTKRQKSKHPPLFFLGSLQKAMSAKFGYGAKEVLDIAQSLYEKYKVTTYPRTD CPYLPLSQKEEVGSILDKLKVVPAFAAWCSAADVNETSACWNDKKITAHHGIIPLPVTPKLHEMNEKELNLYHAIVQRYL AQFYPVAEDDATTIELMVGSQSVKATGKVERVKGWRLVTGKDSEDETTDDSANLPLLSIGQTLTAQFQREDKRTKPPGRF TEGTLIDAMSNIAKFESDPKLKSILKETSGIGTEATRANIIDTLKARGFVTVTGKQLISSEAGRSLIDALPDVLTRPAMT ALWEQALDEIALGNGSLDDFMARQSTFITQLVSMFKQGQYTLKLPKVLAVTLPCPVCQKSMKQLSGKNGKFWVCEDKEQC GLLLNDERGKLPKTTPCTCKKGVLVRKKAKTKGKFWWGCSAYQSGCQRRLFDNEGKPGKEMESNNQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 9e-135 | 49 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 4e-136 | 48 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-134 | 47 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-134 | 47 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-134 | 47 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 6e-138 | 46 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 4e-129 | 45 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 4e-132 | 45 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 6e-117 | 42 |
