Gene Information

Name : SGGB_1697 (SGGB_1697)
Accession : YP_006034514.1
Strain : Streptococcus gallolyticus ATCC 43143
Genome accession: NC_017576
Putative virulence/resistance : Unknown
Product : IS1272 ORF1 and ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1755217 - 1756926 bp
Length : 1710 bp
Strand : -
Note : functional classification: COG3666(L)

DNA sequence :
ATGACTATGTATAAAGAGTATAACACAAATCAGTTGAGTTTGGAACTCAATCTTGCTTACGATATTCCCATGAATCATGA
AGCTAGACTCATTAGTCTTTTTGTGGATAGTATCCCTAATCATGTACTACTAGAAGATAAGTCTCATACGGGTCGCCCCG
CTTTTCATCCAGCTATGCTTTTAAAAATGACACTTTTTGCTTATGCTCGTCAGGTCTTTTCGGGTCGCAAAATCGTTCAG
ATGAATGATGAAGTGATTCCAATGAAATGGTTAAGTCAGGACACCTATGTTAGTTATAAGACCATCAATAATTTCCGTTC
TAGTAAGCATGCTAATAACCTGATTAAGACCGCCTTTATTTACTTCACCCTGCTTATGCGTGAGAATGGCATAATTGAAG
ACGATGCTCTCTTTATCGACGGCACCAAGTTAGAAGCTGATGCCAATCTCTATTCATTTACTTGGAAAAAGGCAATTAAT
AAGTACGAAGAAGCATTGAATGATAAAACCGCTGAACTTTATGACACCCTTGTTCAAGAAGGGGTAGATTTAGCTCTCTC
CAAAGAAGAATGCGAAACTAGTGAAGGATTAGTACACCTTTTAGAAGACACAGAGCAGGCCTTGGCGGAAGTTGAAAAAG
CTATTTCTGAAGAGCCCAAAGTTATCAAAGGAGGCTCTGCTAACAAACAGAAGAGACGTCGTATCAAGAAACTCCGTAAT
CAATTGAAGAAAGATTACCTTCCTCGTAAACAGCGATATGAGAAGAATAGAGAAATTCTTAAGGAACGAAACTCCTTCTC
TAAAACAGACCATGATGCCACCTTTATGCGAATGAAAGAAGATCATATGATGAACGGTCAGCTCAAACCTGGCTACAATG
TCCAAGCTGCCACCAATGGTCAATATGTGCTTGCCTATGACATTTTTTCAAATCCAACAGATACTAGAACTTTAAAGCCA
TTCCTCAACTCTATCCAAACTCTGGATTTGTTCCAACATATTGTAGCCGATGCAGGTTATGGAAGTGAAGAAAACTATGT
TTTTATCATGGATGAGCTGGAAAAAACACCTCTAATCCCTTATGGCATGTATCAAAAAGAATTAAGGAGGAAATATAAGA
ACAGTCCTAATAATCCCTGTAATTGGAATTATCTTGAAGAAACCGACCAGTTTATAAAACCAGACGGAGTGATTTATTCT
TTTAAGAGCTACTCTCGTCGATGTGACAAGTATGGCTTTAAACGTGACTTTAAAATCTATGAGGCAGATAAACTACAAGA
CACACCAGAGTTGGAAGAACTTGCCAAAACAGAAGGTGGCAATCAGAAACACATTTATTACAATCCAACTTGGAATTACT
TTAAAGAACTCATAAAGGAAAAATTGAATAGCGAAGAAGGCTCTCGTATCTACGCCAAACGGAAAACTGATGTCGAACCC
GTTTTTGGTAGATTGAAGAGTGTTTTTGGCGTTCGCAGAGTCCACGTTAGAGGGAGACAAGCCGTTCAAACAGAGATTGG
ATTTCTCTTCATGAGTATGAATCTAACAAAATTGGCTAAGAATCTAGCCTTAAGAACGTTAAACACTCAAAAACCACACA
GTGATTTTATCATCTTGATTGTTTTCAAGACTGAAATCGTTGTGTGGTTTTATTTTAAAGCTAGTTTTTGCCCAACCTCT
TTTTTTGTTTTATCAGGATTTTTTAGATGA

Protein sequence :
MTMYKEYNTNQLSLELNLAYDIPMNHEARLISLFVDSIPNHVLLEDKSHTGRPAFHPAMLLKMTLFAYARQVFSGRKIVQ
MNDEVIPMKWLSQDTYVSYKTINNFRSSKHANNLIKTAFIYFTLLMRENGIIEDDALFIDGTKLEADANLYSFTWKKAIN
KYEEALNDKTAELYDTLVQEGVDLALSKEECETSEGLVHLLEDTEQALAEVEKAISEEPKVIKGGSANKQKRRRIKKLRN
QLKKDYLPRKQRYEKNREILKERNSFSKTDHDATFMRMKEDHMMNGQLKPGYNVQAATNGQYVLAYDIFSNPTDTRTLKP
FLNSIQTLDLFQHIVADAGYGSEENYVFIMDELEKTPLIPYGMYQKELRRKYKNSPNNPCNWNYLEETDQFIKPDGVIYS
FKSYSRRCDKYGFKRDFKIYEADKLQDTPELEELAKTEGGNQKHIYYNPTWNYFKELIKEKLNSEEGSRIYAKRKTDVEP
VFGRLKSVFGVRRVHVRGRQAVQTEIGFLFMSMNLTKLAKNLALRTLNTQKPHSDFIILIVFKTEIVVWFYFKASFCPTS
FFVLSGFFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 5e-84 46
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 1e-86 45
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 1e-86 45
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-86 45
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 8e-87 45
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 3e-85 45
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 2e-89 41