Gene Information

Name : lolD (RSPO_m00616)
Accession : YP_006031790.1
Strain :
Genome accession: NC_017575
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 693551 - 694351 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTGACCCCCTCGCCCTTCGTACCCCTCACGCCCGCAGCGATCGCCCGCCCGCCGGGCTGCTGATCGAGCTGCGCCA
GGTCACGCGCGCCTTCCAGGTGGCCGGCGAGCCGGTCATGGCGGTCCGGGGCATCGACCTGCAGGTGCGCAGCGGCGAGG
TGCTGGCGATCGTCGGGCCGTCCGGCTCCGGCAAGTCGACCATGATGAACCTGATCGGCCTGCTGGACACGCCGACTTCC
GGCCAGTACCGGCTGGCGGGTGTCGATACGCAGACCTTGTCCTCGCAAGAGAAGTCCCGGCTGCGGAACCAGGACATCGG
CTTCGTCTTCCAGCAGTTCCATCTGCTGCCGTCCCTGACCGCGCTGCAGAACGCGCAATTGCCGCTGCTGTATCGCGGCC
TGTCGCAGCGCGCATCGCTCGAGGCGGCGCGGGCCGCGCTGGTCGCGGTGGGGCTGGAACACCGGCTGTCGCACCACCCG
GCGGAGCTGTCAGGCGGCGAGCGGCAGCGCGTGGCCATCGCCCGCGCCATGGCCGGCCAGCCGCGGCTGCTGCTGGCGGA
CGAGCCGACCGGCGCGCTGGATTCCGCAACCGGCGCGCGCGTGCTCGACCTGCTGCGCGACATCACCGCCACGCGGGACA
CAGCGCTGCTGATGATCACCCACGACATGGCGATTGCCCGGCAGCTTCCCCGCCAGGTCGAGATGCGCGATGGGCGCATC
CGTGGCGTCGCGCAGCCCGATGATTCCGCCGCCGATCCGGCATGGCGCCTGCCCGGCAACCGCGCCGGCGTGCCCGCCTG
A

Protein sequence : 
MADPLALRTPHARSDRPPAGLLIELRQVTRAFQVAGEPVMAVRGIDLQVRSGEVLAIVGPSGSGKSTMMNLIGLLDTPTS
GQYRLAGVDTQTLSSQEKSRLRNQDIGFVFQQFHLLPSLTALQNAQLPLLYRGLSQRASLEAARAALVAVGLEHRLSHHP
AELSGGERQRVAIARAMAGQPRLLLADEPTGALDSATGARVLDLLRDITATRDTALLMITHDMAIARQLPRQVEMRDGRI
RGVAQPDDSAADPAWRLPGNRAGVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006031790.1 lipoprotein releasing system ATP-binding ABC transporter NC_008702.1.4606598. Protein 4e-37 50
lolD YP_006031790.1 lipoprotein releasing system ATP-binding ABC transporter NC_012469.1.7686878. Protein 7e-46 48