Gene Information

Name : ibrB (RSPO_m01608)
Accession : YP_006032778.1
Strain :
Genome accession: NC_017575
Putative virulence/resistance : Virulence
Product : immunoglobulin-binding regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1873472 - 1874101 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence :
ATGGAACATCACGATCTGCTGCTGCGAGCGGTGACGCTCTTCCGCGAACTCGACGGCCTGCCGCTTCCGGAGAAGGTGGC
CACGCTCAATGCGCTGCGCCGGATGCTGCATGCGTACAGCCCATTCCACGATGAGCCCACCGACTGCGTGCAATGGGTGC
CGGGGGACCTGGTGCGCGGCAACGCTTACAACCCGAACGCGGTCGCGCCGCCGGAGATGGCACTGCTGGAGCGCTCGATC
CGGGCGGACGGCTACACGCAGCCCATCGTCACGCATCGCGAGCCGCTGCATTTCGAAGTGGTCGACGGTTTTCACCGGCA
GCGCATCGGCACGGCGTCGGGGGCGATCCGCGATCGGCTGCACGGCTACCTGCCCATCGTCACGATCCGGGAGGCGCGGG
GCGGCGTTTCCGATCGCATCGCGGCGACGATCCGGCACAACCGCGCGCGCGGCGTGCACGGCGTGCGTCCGATGACCGAG
ATCGTGATCGCCCTGCTGCGCGCGGGGTGGAGCGATGCCGATGTCGCCAGGGAACTGGGGATGGACAGCGAAGAGGTCTT
GCGCTTCAAGCAGGTCTCGGGCCTGCCGGAGCTGTTCCGGGATCGCCCCTACTCCATGTCGTGGGATTGA

Protein sequence :
MEHHDLLLRAVTLFRELDGLPLPEKVATLNALRRMLHAYSPFHDEPTDCVQWVPGDLVRGNAYNPNAVAPPEMALLERSI
RADGYTQPIVTHREPLHFEVVDGFHRQRIGTASGAIRDRLHGYLPIVTIREARGGVSDRIAATIRHNRARGVHGVRPMTE
IVIALLRAGWSDADVARELGMDSEEVLRFKQVSGLPELFRDRPYSMSWD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-45 54
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-45 54
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 4e-45 53
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 4e-45 53
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-44 52
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-32 51
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-32 51
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-32 51
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 5e-41 50
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-41 50
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 7e-29 47
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-29 46
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 2e-29 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ibrB YP_006032778.1 immunoglobulin-binding regulator VFG1505 Protein 8e-45 52