Gene Information

Name : fliP (RSPO_m01461)
Accession : YP_006032632.1
Strain :
Genome accession: NC_017575
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein flip
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1707405 - 1708154 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCTGTCCGCCCTCCTGCGTCCGCTGGCCGCGCTCGCCCTGCTGTGCGCCGCGCCCGCCGTGTTCGCGCAGGCCCA
GCCCGGCCTGCCGCTGCTGACCGGCGCAGCCGGCGGCCAGAGCTATTCGCTGCCGGTCCAGACGCTGGTCTTCCTGACCT
CGCTCGGCTTCCTGCCGGCCATCCTGCTAATGATGAGCAGCTTCACGCGCATCATCATCGTGCTGTCGCTGCTGCGCCAT
GCGCTGGGCACGCAGACCACGCCGCCCAACCAGGTGCTGATCGGCCTGGCGCTGTTCCTGACCTTCTTCGTGATGTCGCC
GGTGCTGGACAAGGTCTACACCGATGCCTACGTGCCGCTGCGCGACAGCAAGATCTCCGTAGAGCAGGCGCTCGACACCG
CCGCCACGCCGCTGCGCCAGTTCATGCTCAAGCAGACCCGCGAGCCCGACCTCGCCCTGTTCGCCAAGATGGGCAACCTG
CCGCCGATCGCCAGCCCGGACCAGGTGCCGATGCGCGCGCTGATCCCGGCCTTCGTCACCAGCGAACTGAAGACGTCGTT
CCAGATCGGCTTCGCCATCTTCATCCCGTTCCTGGTGATCGACATCGTGGTGGCGGCGGTGCTGATGTCGATGGGGATGA
TGATGGTCACGCCGTCCATCTTCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTGGACGGCTGGCATCTGCTGCTG
GGCTCGCTGGCCCAGAGCTTCACGCAATAG

Protein sequence : 
MKLSALLRPLAALALLCAAPAVFAQAQPGLPLLTGAAGGQSYSLPVQTLVFLTSLGFLPAILLMMSSFTRIIIVLSLLRH
ALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVYTDAYVPLRDSKISVEQALDTAATPLRQFMLKQTREPDLALFAKMGNL
PPIASPDQVPMRALIPAFVTSELKTSFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKIMLFVLVDGWHLLL
GSLAQSFTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 3e-32 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 3e-32 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-31 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-31 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-31 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-31 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 2e-23 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-23 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-30 41
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 8e-23 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 8e-23 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 4e-26 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 4e-26 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 4e-26 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006032632.1 flagellar biosynthetic protein flip VFG2338 Protein 3e-75 72
fliP YP_006032632.1 flagellar biosynthetic protein flip VFG2494 Protein 4e-72 69
fliP YP_006032632.1 flagellar biosynthetic protein flip VFG2016 Protein 8e-59 61
fliP YP_006032632.1 flagellar biosynthetic protein flip VFG1259 Protein 2e-61 60
fliP YP_006032632.1 flagellar biosynthetic protein flip VFG0188 Protein 8e-31 41
fliP YP_006032632.1 flagellar biosynthetic protein flip VFG2131 Protein 6e-31 41