Gene Information

Name : RSPO_m01294 (RSPO_m01294)
Accession : YP_006032465.1
Strain :
Genome accession: NC_017575
Putative virulence/resistance : Virulence
Product : type I (cyclolysin-type) secretion system ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1506804 - 1508627 bp
Length : 1824 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGAATCCTCGATCAAAGACACGCACGCAGCGCCGCAGCAGGGCGCGTGGAGCATCATGCGGCCCGTGCGCGGGCA
GATCCGTTTCGCGATGGGCCTAGCCTCGCTTGCGGTGTTGCTGGGTCTAGCCTTCCTGTTGTCGCTCGCGTGGATTGTCC
ACCGCCTCGACGCGCTGCCGCACGCATGGCCCGCTTGGCCAGTGGCATGCGCCTTCGTCTGCCTGATCGGCAGCTATCTG
GCGCGGCTCGGCGCATTCGGCCAGTCCCATCGCGCGGCCTTCCGGCTGGAGAAGATCCTGCGCAGCGAGCTGACCGCGCA
CCTGACGCGCGTGCCGCTGGGAACGCTGCAGCAGGTCGGAGCCGGTGCGCTGTCGAAGGTCGTGCACGACGACGTGAAGG
CCCTGCACATCTTCGTCGCCGACAGCACCCCGCTCTACGCGCGCGCGTTCGTCGGGCCGGCGTGCACGCTTGCCGTGCTG
CTCTGGCTCGATTGGCGCTTCACGCTCGGGGCGGTGGCGGTGCTGGCCATCGGGTTCGGCCTGCTGCGGCTCTCGATGCG
CAATGCCGCGCAGATGGGCCGGCTGTACAACGCGGCCCGCGAGCGCGTGAGCGCGGCCGTCATCGAGTTCGTGCAGGCCA
TGCCCGTCGTGCGCACGTTCGATGCCGGCTATTCGACGTTCGGGCGCTACCAGCATGCGCTCGATGCGTATGTCGACGTG
TTGACACGCTGGTATCGGCAGGCGGGCTTCTCCGCGCGATGTTCGTTCGCGGTGCTCAATCCGTTGCCGACGCTGCTTGT
GCTGCTCTGGCTCGGCGTCGTGCTGCGCGCGCGCGGTGCGGTGGAGTTCGGCACGTGGTCCGCCGTGCTGCTGATCGGCA
CCGGCATGGCCGAGGCGATGATGCCGATGATGACGCTCAACCATCTGGTCGCCAAGGCCAAGCTGAGCGTCGCGCGCATC
CAGCAGATCATGGCCTTGCCGCTATTGCCCGTCCCTCGGGAAGGACGCGCGCCGGCCGATGCAAGCGTGGCGTTCGAGCA
TGTCGGCTTCCGCTATGCCGGCGCCGATGCCGGCGGTGCGCTTGTCCTGCGCGACGTGAGCTTCCGCGTGGCGCCGGGCA
CGAAGACGGCGCTCGTCGGCGCGTCGGGCGCGGGCAAGACGACGGCCGCACGGCTGATTCCGCGCTTCTGGGACGCCGAT
GCCGGACGCGTGCTCGTCGGCGGCATCGACGTGCGCGACATGACGGCCGATACGCTGATGTCGCAGGTGGCGTTCGTGTT
CCAGGACACCTTCCTCTTTGCCGATACGATCGCAAACAACATTCGCCTCGGCTCGCCGGGCAGCACGATGGGCGACGTGA
TCGCCGCCGCCAAGGCCGCGCAGGCGCACGAATTCATCCTGCGCCTGCCGGACGGATACAACACGCGCGCGGGCGAGCGG
GGCGCGTTCCTGTCGGGCGGGCAGCGACAGCGCATCACGATCGCGCGCGCGATGCTGCAGAACCGCCCGATCCTGGTGCT
CGACGAGGCCACCGCCTTCTCCGATCCGGAGAACGAGGCCGAACTGATGCGGGCCCTCGCGCGCCTGATGCGCGGCAAGA
CGGTCATCATGATCGCGCACCGGCTGTCGACGATCCGCGACGCCGACCAGATCCTCGTGTTCGACAAGGGGGAGGTGATC
GAGCGCGGCCGGCACGATGCGCTGCTGTCGATCCAAGGCGTCTACGCGCGGCTCTGGGCCAGCCACGAGCGCGTGCAGCG
CTGGGTCCTGCGCGGCGATGCGCGGGCGAGCCGGCCCCAGACCGAACTGGAGCACGCGGAATGA

Protein sequence :
MPESSIKDTHAAPQQGAWSIMRPVRGQIRFAMGLASLAVLLGLAFLLSLAWIVHRLDALPHAWPAWPVACAFVCLIGSYL
ARLGAFGQSHRAAFRLEKILRSELTAHLTRVPLGTLQQVGAGALSKVVHDDVKALHIFVADSTPLYARAFVGPACTLAVL
LWLDWRFTLGAVAVLAIGFGLLRLSMRNAAQMGRLYNAARERVSAAVIEFVQAMPVVRTFDAGYSTFGRYQHALDAYVDV
LTRWYRQAGFSARCSFAVLNPLPTLLVLLWLGVVLRARGAVEFGTWSAVLLIGTGMAEAMMPMMTLNHLVAKAKLSVARI
QQIMALPLLPVPREGRAPADASVAFEHVGFRYAGADAGGALVLRDVSFRVAPGTKTALVGASGAGKTTAARLIPRFWDAD
AGRVLVGGIDVRDMTADTLMSQVAFVFQDTFLFADTIANNIRLGSPGSTMGDVIAAAKAAQAHEFILRLPDGYNTRAGER
GAFLSGGQRQRITIARAMLQNRPILVLDEATAFSDPENEAELMRALARLMRGKTVIMIAHRLSTIRDADQILVFDKGEVI
ERGRHDALLSIQGVYARLWASHERVQRWVLRGDARASRPQTELEHAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 3e-142 59
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 3e-142 59
ybtP CAA21388.1 - Virulence HPI Protein 3e-142 59
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 3e-142 59
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 3e-142 59
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 3e-142 59
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 4e-142 57
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 1e-140 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPO_m01294 YP_006032465.1 type I (cyclolysin-type) secretion system ATP-binding component BAC0432 Protein 1e-142 59