Gene Information

Name : hrcV (RSPO_m01182)
Accession : YP_006032354.1
Strain :
Genome accession: NC_017575
Putative virulence/resistance : Virulence
Product : hrp protein hrcv
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1333156 - 1335228 bp
Length : 2073 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAAAAAGAACGCAATCCAGGATTTCAGCGGCGAAATCGGCATCGCCTCGCTGGTGGTCGCCGTGGTGGCACTGAT
GGTGCTGCCGCTGCCGACCATGCTGATCGACGCGCTGCTCGGCCTGAACATCACGCTCTCGGTCGTGCTGCTGATGGTGA
CGATGTACATTCCGTCGGCGACCTCGCTGTCGGCGTTTCCGTCGCTGCTGCTGTTCACGACGCTGCTGCGGCTGTCGCTG
AACATCGCCTCCACCAAGTCCATTCTGCTGCACGCGGATGCCGGCCACATCATCGAAAGCTTCGGCAAGCTGGTGGTGGG
CGGCAACCTGGTGGTGGGCCTGGTGGTCTTCCTGATCATCACCACGGTGCAGTTCATCGTGATCGCCAAGGGCTCGGAGC
GCGTGGCCGAAGTCGGCGCGCGGTTCACGCTGGACGCCATGCCCGGCAAGCAGATGAGCATCGACGCCGACCTGCGCGCC
GGCCACCTGTCGCCGGAAGAGGCCCGCAAGCGCCGCGCGCTGCTGGCGATGGAAAGCCAGTTGCACGGCGGCATGGACGG
CGCCATGAAGTTCGTCAAGGGCGACGCCATTGCCGGCCTGGTCATCACGCTGGTCAACATCCTGGCCGGTATCGTGATCG
GCATCACGTACCACAACATGACCGCCGGCGAGGCCGCCAACCGCTTCGCGGTGCTGTCGATCGGCGATGCCATGGTCTCG
CAGATCCCGTCGCTGCTGATCTCGGTGGCGGCCGGCGTGATGATCACCCGCGTCTCCGACGAAGAGCAGGCCCACAAGCA
GTCGTCGCTGGGCATGGAGATCGTGCGGCAGCTGTCGACCAGCGCGCGCGCCATGTTCACCGCCAGCGCCCTGCTGATGG
GCTTCGCGCTGGTGCCGGGGTTTCCGTCGTTCCTGTTCATCGTCCTGGCGGGGCTGATCTTCACCTTCGGCTACGTGCTG
CGCAACCGCACCAAGCAGGACGACGGCGACGACGGCGACACCCTGCCCGCGCTGCTGCGCGAAGGCTCGAAGGCCAAGGC
GCCGAACATTGCCGAGCAGGCCCCGTCCTTCACCGTGCCGGTGGGCGTGCGGCTCGGCGCGGAGCTTGCCAAGGGCCTGG
ATGTGCCGGCCCTCGACACCGCCTTCCAGAAAGGCCGCCACGCGCTGGCCGAAGCGCTCGGGCTGCCCTTCCCCGGCATC
GCGATCTGGAAGGCCGACGCACTGCAGCCCGACAGCTACGAGGTGCGCGTGCACGATATTCCGGGCGCGCCGGTCGCGGT
GCCCGACGGCCATCTGCTGATCCCCGACCTGCCGGAGGCCCTGCGCGCGCAGGCGGTCGAGGCGGCGGGGCTGCCCGACC
ACCCCGCGCCGCACTGGATCGCACCGGCCCATGTGAGCCACGACGCGGACCTGACTGCCACCGGCCTGCGCGTGGAACGC
GTGATCGCCGACCACGTCGTGCACGTGCTGCGCCGCAGCGCCCACCTGTTCGTCGGTCTGCAGGAAACGCAGTGGATGCT
GGAGCGCGTCACCACCGACTACCCCGGCCTAGTGGCCGAAGCCCAGAAGGCCGTGCCGGCCCAGCGGATCGCCGACGTGC
TGCGGCGCCTGCTGGAAGAGCAGGTGCCCATCCGCAACATGCGCGCCATTCTCGAAAGCCTGGTGGTCTGGGGCCCCAAG
GAAAAGGACACGCTGATGCTGGTGGAGTACGTGCGCGGCGACCTGGGCCGCCAGATCGCGCACCAGGCCACCGGCGGCAC
CCGCCAGATGCCGGCCATCCTGCTGGACCTGTCGGTCGAGCAGACCGTGCGCCAGGCCATCAAGCCCACTCCGGCGGGCA
ACTTCCTGACGCTCGATCCGCAGCAGGTGGAAGCCATCGTCATGCGGCTGCGCGGCATCATGCAGGGCGGCGCCGACGAG
GTCCCCGCGCCGATGGCCATCGTCACTTCGATGGACATCCGCCGCTACGTCCGGCGCATGATCGAGCCGCACCTGCAGGC
GCTGAACGTGTACTCGTTCCAGGAACTGGGCGGCTACGTCGACCTGCGGCCGGTCGGCAAGCTGGTGCTGTAG

Protein sequence : 
MAKKNAIQDFSGEIGIASLVVAVVALMVLPLPTMLIDALLGLNITLSVVLLMVTMYIPSATSLSAFPSLLLFTTLLRLSL
NIASTKSILLHADAGHIIESFGKLVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRA
GHLSPEEARKRRALLAMESQLHGGMDGAMKFVKGDAIAGLVITLVNILAGIVIGITYHNMTAGEAANRFAVLSIGDAMVS
QIPSLLISVAAGVMITRVSDEEQAHKQSSLGMEIVRQLSTSARAMFTASALLMGFALVPGFPSFLFIVLAGLIFTFGYVL
RNRTKQDDGDDGDTLPALLREGSKAKAPNIAEQAPSFTVPVGVRLGAELAKGLDVPALDTAFQKGRHALAEALGLPFPGI
AIWKADALQPDSYEVRVHDIPGAPVAVPDGHLLIPDLPEALRAQAVEAAGLPDHPAPHWIAPAHVSHDADLTATGLRVER
VIADHVVHVLRRSAHLFVGLQETQWMLERVTTDYPGLVAEAQKAVPAQRIADVLRRLLEEQVPIRNMRAILESLVVWGPK
EKDTLMLVEYVRGDLGRQIAHQATGGTRQMPAILLDLSVEQTVRQAIKPTPAGNFLTLDPQQVEAIVMRLRGIMQGGADE
VPAPMAIVTSMDIRRYVRRMIEPHLQALNVYSFQELGGYVDLRPVGKLVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3013 YP_244081.1 HrcV protein Virulence Hrp PAI Protein 2e-141 58
hrcV NP_636603.1 protein HrcV Virulence Hrp PAI Protein 2e-141 58
hrcV AAP34346.1 HrcV Virulence Hrp PAI Protein 5e-140 57
hrcV YP_362156.1 HrcV protein Virulence Hrp PAI Protein 1e-139 57
hrcV YP_198723.1 protein HrcV Virulence Hrp PAI Protein 8e-139 57
hrcV NP_640760.1 HrcV protein Virulence Hrp PAI Protein 3e-140 57
hrcV BAB07859.1 HrcV Virulence Hrp PAI Protein 6e-139 57
lssD AAO18050.1 LssD Virulence TTSS locus Protein 5e-120 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hrcV YP_006032354.1 hrp protein hrcv VFG0064 Protein 1e-117 46
hrcV YP_006032354.1 hrp protein hrcv VFG0198 Protein 4e-112 45
hrcV YP_006032354.1 hrp protein hrcv VFG0384 Protein 5e-113 43