|
Name : clpB (RSPO_m01076) Accession : YP_006032249.1 Strain : Genome accession: NC_017575 Putative virulence/resistance : Virulence Product : chaperone clpb Function : - COG functional category : - COG ID : - EC number : - Position : 1210217 - 1212940 bp Length : 2724 bp Strand : + Note : - DNA sequence : ATGGCCACCCCACTCAAGACCTTGATCGCCAAGCTGAACGCGACCAGCCGGCAGGCTGCCGAGCACGCGGCCTCGCTGTG CATGGCGCGCGGCAACTATGAAGTCGACCTGGAGCACCTGTTCCTGGCGCTGCTGGAAAGCCGCCGCAGCGACTTCGCCG TGGCCGCGCGCGCCAGCGGCATCGACCTGGCGGCGCTGCAGCGCGACCTGGAAGCCGAGATCGCGCGCTTCCAGACCGGC AACACGCGCACGCCGGCGTTCTCGCCGTATCTGCCCAAGCTGTTCGAGCATGCGTGGCTGATCGCCTCGCTGGATTCGCA GATCACGCGCATCCGCTCGGGCCACCTGTTGCTCGCGCTGCTGACCGAGCCCAGCCTGGCGGCGCTGGCCGAGCGCGGCT CGCGGCTGTTCGGCCGTTTCGAGGTGGAGCGGCTCAAGCATGATTTCGAGCGCATGACCGCGGGCTCCGACGAGCAGGAA CAGGCTGTCGATTTCGCAGACAGCACGGCCGCGCAGACCGATGACGGCCGCGCGCCCGCTGCCGCGCTGAGCGCGACTCC GGCCCTCGACCAGTTCACCGTGGACCTGACGCAGGCCGCCCGCGAAGGCCGCATCGATCCTGTGATCGGACGCGATGCGG AGATCCGCCAGGTGGTCGACATCTTGATGCGCCGGCGCCAGAACAACCCGATCCTGACCGGCGAGGCCGGCGTCGGCAAG ACCGCGGTGGTGGAGGGCCTCGCGCTGCGCGTGGCCGCCAACGATGTGCCGCCGCCGCTGCAGGGCGTCACGCTGCGCAC GCTCGACATGGGCCTGCTGCAGGCCGGCGCGAGCGTGAAGGGCGAATTCGAGAACCGCCTGAAGAACGTGATCGACGAGG TCAAGAAGAGCCCGAAGCCGATCATCCTGTTCATCGACGAGGCGCACACCATCATCGGCGCGGGCGGGCAGGCCGGCCAG AACGATGCGGCCAACCTGCTCAAGCCAGCGCTGGCGCGCGGGGAGCTGCGCACCATTGCCGCGACCACGTGGAGCGAGTA CAAGAAGTACTTCGAAAAGGACGCCGCCCTCGCACGCCGCTTCCAGGTCGTCAAGGTCGAAGAGCCCAGCGAGCCGCTGG CCGCGGCCATGCTGCGCGGCATGGCACCGCTGATGGAGCGCCACTTCGGCGTGCGCGTGCTGGACGAGGCCATTACCGAG GCCGTGCGCCTGTCGCACCGGTATATCAGCGGGCGCCAGTTGCCGGACAAGGCCGTCAGCGTGCTGGACACGGCGTGCGC CAAGGTGGCCCTGGGCCAGAGCGCCACGCCGGGCGCCATCGAAGACGACCAGAAAGCGCTGGAACGCCTGCTGGGCGAGA TTGCAGCGCTGCAGCGCGAGCAGAGCGCCGGCGCCGCGCACGATGCCCGCCTGGACGCACTGCAGGCCAAGCGGGCCGAG CTGGAACAGCGCATCGCGCAGAACACCGAGCGCCTGGCCCAGGAGCGCGCCCTGGTGGCGCGCATCCAGGCGCTGCGCGA GGCCCGTGAAGGCGGTGCCGCGCAAGCCGGTGGGCAGGACGCGGAGCCGATGGCGGCCAACAGCGACGTGGTCGCGATGC CGGCCAAGCGCGGCCGTGCCGCCGCCGCGCCGGACTCGCCGGACGAACTGACCGCGCTGCTCGCCGAGCTGCGCGCGCTG CAGGGCGAAACGCCCATGGTGCCGCTGCACGTGGACGGCCATGTCGTGTCGGAGATCGTCTCGGCCTGGACCGGCATTCC GCTGGGCCGCATGGTCAAGGACGAACTGCGTACCGTGCTCAACCTCAAGCCGCTGCTGGCCGCGCGCGTGATCGGCCAGG ATCACGCGCTGCAGGCCATCGCCCAGCGCGTGCGCACCGCCTCGGCCAACCTGGAAGATCCGAACAAGCCGCGCGGCGTG TTCCTGTTCGCCGGTCCGTCCGGCGTGGGCAAGACCGAGACGGCGCTGGCGCTGGCCGACATCCTCTACGGCGGCGAGCG CAAGCTCGTCACCATCAACATGAGCGAGTACCAGGAGGCGCACAGCGTCTCGGGCCTGAAGGGCTCGCCGCCGGGCTACG TGGGCTACGGCGAGGGCGGTGTGTTGACCGAGGCGGTGCGCCGCAACCCGTACAGCGTGGTGCTGCTGGACGAAGTCGAG AAAGCCCACCCCGACGTGCTGGAGATGTTCTTCCAGGTGTTCGACAAGGGCGAGATGGACGACGCCGAAGGCCGCCCCAT CGACTTCCGCAACACCATCATCATCCTGACCTCGAACGTGGGTTCGTCGGCCATCATGCAGGCCTGCCTGAACAAGCCGG CCGAGGAACTGCCCGACGCCGACACCCTGGCCGAGACGCTGCGGCCGGTGCTGTACAAGACCTTCAAGCCGGCCTTCCTG GGGCGGACCAAGGTGGTGCCGTACTACCCGATCGCCGACGACGTGCTGGCCGAGATCATCACGCTCAAGCTCGGCCGCAT CCGCGACCGCGTGGCCGCCAACCACAAGGCGACGTTCCAGTGGGACACCGCGCTGGTGGAATCCGTGCTGGCCCGCTGCA CCGAAGTGGACGCGGGCGCGCGCGCGGTCGACCACATCCTCAACGGCACGCTGCTGCCCGAGATCGCCGAAGCGGTGCTC ACGCGCATGGCCGAAGGCGGCAGCGTCGAGAAGATCAAGGTCAGCGTCGGCAAGACCGGCGAGTTCAAGTACCGCATCAA CTGA Protein sequence : MATPLKTLIAKLNATSRQAAEHAASLCMARGNYEVDLEHLFLALLESRRSDFAVAARASGIDLAALQRDLEAEIARFQTG NTRTPAFSPYLPKLFEHAWLIASLDSQITRIRSGHLLLALLTEPSLAALAERGSRLFGRFEVERLKHDFERMTAGSDEQE QAVDFADSTAAQTDDGRAPAAALSATPALDQFTVDLTQAAREGRIDPVIGRDAEIRQVVDILMRRRQNNPILTGEAGVGK TAVVEGLALRVAANDVPPPLQGVTLRTLDMGLLQAGASVKGEFENRLKNVIDEVKKSPKPIILFIDEAHTIIGAGGQAGQ NDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSEPLAAAMLRGMAPLMERHFGVRVLDEAITE AVRLSHRYISGRQLPDKAVSVLDTACAKVALGQSATPGAIEDDQKALERLLGEIAALQREQSAGAAHDARLDALQAKRAE LEQRIAQNTERLAQERALVARIQALREAREGGAAQAGGQDAEPMAANSDVVAMPAKRGRAAAAPDSPDELTALLAELRAL QGETPMVPLHVDGHVVSEIVSAWTGIPLGRMVKDELRTVLNLKPLLAARVIGQDHALQAIAQRVRTASANLEDPNKPRGV FLFAGPSGVGKTETALALADILYGGERKLVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVE KAHPDVLEMFFQVFDKGEMDDAEGRPIDFRNTIIILTSNVGSSAIMQACLNKPAEELPDADTLAETLRPVLYKTFKPAFL GRTKVVPYYPIADDVLAEIITLKLGRIRDRVAANHKATFQWDTALVESVLARCTEVDAGARAVDHILNGTLLPEIAEAVL TRMAEGGSVEKIKVSVGKTGEFKYRIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-139 | 44 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-139 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006032249.1 | chaperone clpb | VFG2076 | Protein | 0.0 | 52 |
| clpB | YP_006032249.1 | chaperone clpb | VFG2084 | Protein | 4e-149 | 46 |
