Gene Information

Name : alpA (RSPO_c00968)
Accession : YP_006028805.1
Strain : Ralstonia solanacearum Po82
Genome accession: NC_017574
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator; CP4-57 prophage
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1007752 - 1007955 bp
Length : 204 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGAACAAATCCAAACAGCTCTGACCATCCTGCGCCGCAAGCAGGTTGAAGCCGCAACTGGGCTCTCGCGCTCGAG
CATCTACCAACGCATCAAGGAACGGACCTTTCCCGCAGCGATCCAGCTAGGCCCGCGGGCTGTCGGCTGGCGAGCCGGCG
ACATTGAAGCATTCTTGGCAAACCCCGCCGAATACAAGGCTTAA

Protein sequence :
MAEQIQTALTILRRKQVEAATGLSRSSIYQRIKERTFPAAIQLGPRAVGWRAGDIEAFLANPAEYKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 4e-08 50
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 4e-05 44
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 7e-08 43
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-06 42
unnamed CAA21398.1 - Not tested HPI Protein 1e-06 42
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 6e-07 42
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 4e-07 42
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 6e-07 42
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 1e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alpA YP_006028805.1 DNA-binding transcriptional activator; CP4-57 prophage VFG1141 Protein 2e-07 42