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Name : pilB (RSPO_c00683) Accession : YP_006028521.1 Strain : Ralstonia solanacearum Po82 Genome accession: NC_017574 Putative virulence/resistance : Virulence Product : type IV pilus assembly protein Function : - COG functional category : - COG ID : - EC number : - Position : 715058 - 716785 bp Length : 1728 bp Strand : - Note : - DNA sequence : ATGACTCTCGGACTCGCACTTACGCAGAGCCGGCGAATTGCGCCGACATTACTCACTCAGCTAGAGCAGAGCGCGCGCGA AAAGCGCACGCAGTTGATCGACGAACTGGTGAGCAGCGGCATCATGAGCGCGCACGACCTCGCCGTCTTCGTGGCGGGCA AGTACCAGATGCCGCTGCTGGACCTGGCGCAGTACAAGCTCGACACCGTGCCGGCCGTGCTGTCGACCAACAAGCATTTC CAGCAACTGCGCCTGCTGCCGCTGGGCCGGCGCGACAACCGCATCATCGTTGCCACCTCGGACCCGAGCGACCCGAAGCC GATCGAAGAACTGCGCCAGAAGATGAACGTGGCGATCGAGACGGTCATCGTCGAGCACGACAAGCTGGTGCGCCAACTGA GCCTCGCCAACGAAGCGCCGCCCGAGATCAAGTCGCTCATCCCCAAGCAGGAAACCACCCAGATCGAATACGACCCGGGC GCAGCCGCGGCCGTGCGGCGTACCCCGACCGACGGCATCGACGATGCGCCGGTGGTGCGCTTCCTGCAGAAGCTGTTCAC CGAGGCGCTGCTGCGCGGCACGTCCGACTTGCACTTCGAGCCGTTTGAAACGTTTTACCGCGTGCGCTTCCGCATCGACG GCATCCTTGAACAAGTCGCGCAACCGCCGCTGGACATCCGCGACAAGATCGCCACCCGCATCAAGGTGCTATCGCGCCTG GACATCTCGGAAAAACGCGTGCCGCAGGACGGCCGCATGAAGCTGCTGATCACCGTTCCGAAGGACAAGAACGACAAGGA CAACAAGGAGACGGTCGATCGCGCCATCGACTTCCGGGTGTCGACGCTGCCGACGCTGTTCGGCGAGAAGATCGTGATCC GGATTCTGGAGTCCTCGACCGAGCGGCTCGATATCGACCAGCTCGGCTATGAGCCCGAGCAGAAGCAGCTCCTGCTGGAC GTGATCAAACGCCCCTACGGCATGGTGCTGGTGACCGGCCCCACCGGTAGCGGCAAGACGGTGTCGCTGTACACCTTCCT GAACAAGCTGAACCAGGGCGACATCAACATTTCCACCGCGGAAGATCCGGCCGAAATTCAACTGCCCGGCATCAACCAGG TCAACGTCAACGACAAGGCGGGGCTGACCTTCGCCGCGGCGCTGAAATCGTTCCTGCGCCAGGATCCCGACATCATCATG GTGGGCGAAATCCGGGATCTCGAAACCGCCGACATCTCCATCAAGGCCGCACAGACCGGCCACTTGGTGTTCTCCACGCT GCACACCAACGACGCGCCGACCACGCTCACACGCCTGATGAACATGGGCGTGGCGCCGTTCAACATCGCCTCGTCGGTGC TGATGATCACGGCGCAGCGTCTGGGGCGGCGCCTGTGCAAGGCCTGCAAGAAGCCGGGCCCGCTGCCCAAGGAAACGCTG CTGGACGCGGGCTTCAAAGAAGAAGACCTGGACGGCTCGTGGCAGCCGTACCATCCGGTCGGCTGCGAGGCATGCAACAG CAGCGGCTACAAGGGCCGGGTCGGCATCTACCAGGTCATGCCGATCACCGAGGCGATCCAGGAGATCATCCTCGCCCACG GCACCGCGCTGCAGATCGCCGAACAGGCGCGCAAGGAGGGCGTGCTCTCGCTGCGTGACTCCGGCCTGAGAAAAGTGAAG CAGGGGCTGACTTCCCTTGAGGAAGTGCTGGCCACGACGAACCAGTAA Protein sequence : MTLGLALTQSRRIAPTLLTQLEQSAREKRTQLIDELVSSGIMSAHDLAVFVAGKYQMPLLDLAQYKLDTVPAVLSTNKHF QQLRLLPLGRRDNRIIVATSDPSDPKPIEELRQKMNVAIETVIVEHDKLVRQLSLANEAPPEIKSLIPKQETTQIEYDPG AAAAVRRTPTDGIDDAPVVRFLQKLFTEALLRGTSDLHFEPFETFYRVRFRIDGILEQVAQPPLDIRDKIATRIKVLSRL DISEKRVPQDGRMKLLITVPKDKNDKDNKETVDRAIDFRVSTLPTLFGEKIVIRILESSTERLDIDQLGYEPEQKQLLLD VIKRPYGMVLVTGPTGSGKTVSLYTFLNKLNQGDINISTAEDPAEIQLPGINQVNVNDKAGLTFAAALKSFLRQDPDIIM VGEIRDLETADISIKAAQTGHLVFSTLHTNDAPTTLTRLMNMGVAPFNIASSVLMITAQRLGRRLCKACKKPGPLPKETL LDAGFKEEDLDGSWQPYHPVGCEACNSSGYKGRVGIYQVMPITEAIQEIILAHGTALQIAEQARKEGVLSLRDSGLRKVK QGLTSLEEVLATTNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-78 | 43 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-78 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_006028521.1 | type IV pilus assembly protein | VFG0233 | Protein | 7e-133 | 53 |
| pilB | YP_006028521.1 | type IV pilus assembly protein | VFG2426 | Protein | 1e-106 | 52 |
| pilB | YP_006028521.1 | type IV pilus assembly protein | VFG0112 | Protein | 2e-129 | 52 |
| pilB | YP_006028521.1 | type IV pilus assembly protein | VFG1880 | Protein | 3e-120 | 47 |
| pilB | YP_006028521.1 | type IV pilus assembly protein | VFG1876 | Protein | 5e-79 | 45 |
| pilB | YP_006028521.1 | type IV pilus assembly protein | VFG0182 | Protein | 4e-80 | 43 |
| pilB | YP_006028521.1 | type IV pilus assembly protein | VFG2048 | Protein | 2e-77 | 43 |
