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Name : gspE (RSPO_c00370) Accession : YP_006028210.1 Strain : Ralstonia solanacearum Po82 Genome accession: NC_017574 Putative virulence/resistance : Virulence Product : general secretion pathway protein e Function : - COG functional category : - COG ID : - EC number : - Position : 390291 - 391847 bp Length : 1557 bp Strand : - Note : - DNA sequence : ATGGCAACGCAAGCTTCTTCCCCCGACGCACGCACGCTTGAGCCGCCCTCGCCCTCGGCGGTGCGGCTGGTGCCGTACGC GTTTGCGCGCGACGCCCGGCTGCTGGTCGCGCGGCAGGATGTCGACACGCTCGAGGTGTGGGTCTGCCCCGAGACCTCGC GCACCGCGCTGGCCGAGCTGGCCCGCGTGTTCGGCGCGCTGCGGCTGGTCAGCCTGGACGCCGCCGCGCTCTCCACCGCC ACGCAGACGGCCTACAACGCACAGGACGGCAGCGCCGCCCAGGTGGTCGGCGAGGTGGAGGGCGAGGTGGACCTGTCGCG CCTGATGCAGGACATCCCCGCCGTGGAAGACCTGCTCGAATCGGAAGACGACGCGCCGATCATCCGCATGATCAACGCGC TGCTGACGCAGGCCGCGCGCGAAGGCGCCTCGGACATCCACATCGAGCCGTTCGAGAACGCCTCGGTGGTGCGCTTCCGG GTGGACGGCACGCTGCGCGACGTGGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGCATCAAGATCATGGC GCAGCTCGACATCGCCGAGAAACGCCTGCCGCAGGACGGCCGCATCACGCTGCGCGTGGGCGGGCGGCCGGTGGACGTGC GTGTCTCCACCCTGCCCACCGGCCACGGCGAGCGCGCGGTGCTGCGCCTGCTCGACAAGGAGGCCGGACGGCTGGATCTC GGCAAGCTCGGCATGGGCGCCGGCACGCTGGCGCGTTTCGATCATCTGATCAACCAGCCGCACGGCATCGTGCTCGTCAC CGGCCCGACCGGGTCGGGCAAGACCACCACGCTGTATGCCGCGCTGTCGCGGCTCGATGCCGGCAGCACCAACATCATGA CGGTGGAGGACCCGATCGAGTACGACCTGGACGGCATCGGCCAGACCCAGGTCAACCCGAAGATCGACATGACCTTCGCC AAGGCCCTGCGCGCCATCCTGCGGCAGGACCCGGACGTGGTGATGATCGGCGAGATCCGCGACCTGGAGACCGCGCAGAT CGCCGTGCAGGCTTCGCTGACCGGCCACCTGGTGCTGGCTACGCTGCACACCAACGATTCGGCCTCGGCGGTGACGCGGC TGATCGACATGGGGATCGAGCCGTTCCTGCTGTCGTCATCGCTGCTGGGCGTGCTGGCGCAGCGGCTGGTGCGGCGCCTG TGCGTACACTGCCGCCGCGAGGAAGTGCTGGACCTCACGCCCTCCGAGATCGAAGCCGTGGCCGGCACGCCGCCCGCGGA CGGCACCGCCTCCGCCGTGCCGACGCGCCGCTCGGTGTGGCATCACGTCGGCTGCGAGCATTGCGGCCAGTCGGGCTACC AGGGCCGGACCGGCGTGTATGAGCTGCTGACGGTGACGCCCGAGATCCAGACCATGATCCACCGCCAGGCACCCGAGTCC GAGATCAAGGCGCTCGCCATCGGCCAGGGCATGCACACCATGCGTGCGGATGCGCAGCGGTGGCTGGACGCGGGCGCGAC GTCGCTGGAAGAAGTGCTGCGCGTGACGCGTGACTGA Protein sequence : MATQASSPDARTLEPPSPSAVRLVPYAFARDARLLVARQDVDTLEVWVCPETSRTALAELARVFGALRLVSLDAAALSTA TQTAYNAQDGSAAQVVGEVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFENASVVRFR VDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDL GKLGMGAGTLARFDHLINQPHGIVLVTGPTGSGKTTTLYAALSRLDAGSTNIMTVEDPIEYDLDGIGQTQVNPKIDMTFA KALRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSASAVTRLIDMGIEPFLLSSSLLGVLAQRLVRRL CVHCRREEVLDLTPSEIEAVAGTPPADGTASAVPTRRSVWHHVGCEHCGQSGYQGRTGVYELLTVTPEIQTMIHRQAPES EIKALAIGQGMHTMRADAQRWLDAGATSLEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-106 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-106 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_006028210.1 | general secretion pathway protein e | VFG0182 | Protein | 2e-116 | 54 |
| gspE | YP_006028210.1 | general secretion pathway protein e | VFG1876 | Protein | 4e-109 | 52 |
| gspE | YP_006028210.1 | general secretion pathway protein e | VFG2048 | Protein | 4e-106 | 50 |
| gspE | YP_006028210.1 | general secretion pathway protein e | VFG0233 | Protein | 2e-78 | 46 |
| gspE | YP_006028210.1 | general secretion pathway protein e | VFG0112 | Protein | 2e-76 | 45 |
| gspE | YP_006028210.1 | general secretion pathway protein e | VFG2426 | Protein | 4e-68 | 43 |
