|
Name : thiC (RSPO_c03253) Accession : YP_006031080.1 Strain : Ralstonia solanacearum Po82 Genome accession: NC_017574 Putative virulence/resistance : Unknown Product : thiamin (pyrimidine moiety) biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 3373742 - 3375637 bp Length : 1896 bp Strand : + Note : - DNA sequence : ATGCCCCAAGCCAAGAACGCCCCCGCCACCTCATTCGACTCGCTGCAGACCGAGCTCGACCAGAAATTCGCTTATCCGGC CTCCAGCAAGACCTACATCACCGGCAGCCGCCCGGACATGCGCGTACCGATGCGCACCATCAGGCAGACCGCTACGCGCA CCGACCAGGGCGAGATGCTGAACCCGCCGGTCCCCGTGTACGACACATCGGGCCCGTACTCCGACCCCGACGTGCACATC GACCTGAAGGCGGGCCTGGCCCCGCTGCGCGCCAAGTGGATCGACGAGCGCGGCGACACCGTGGTGCTGCCGGGCCTGTC GTCGGAATACGGCCAGGCGCGCGCGCATGACCCCGCCACCGCCCACCTGCGCTTTGCGCAACTGACCAACCCGCGCCGCG CCAAGCCGGGCGCGAACGTGAGCCAGATGCACTACGCGCGCCGCGGCATCATCACGCCCGAGATGGAATACGTCGCGCTG CGCGAATCGCTGAACCTGCAGGCGCTTCAAGACAAGCCCGAGTACCGCAAGCTGCTCAAGCAGCATCCGGGCTTCTCGTA CGGCGCCAACCTGCCGCAGCGCCCGGAAGACATCACGCCGGAATTCGTGCGCCAGGAGATCGCCGCCGGCCGCGCCATCA TTCCGGCCAACATCAACCACGTCGAGCTGGAGCCGATGGCCATCGGCCGCAACTTCCGCGTGAAGATCAACGGCAACCTG GGCAACTCGGCGGTCACCTCGTCGCTGGCCGAGGAAGTGGAAAAGATGGTGTGGGCGATCCGCTGGGGCGCCGACACCAT CATGGACCTGTCCACCGGCAAGCACATCCACGAGACGCGCGAATGGATCCTGCGCAACTCGCCGGTGCCCATCGGCACGG TGCCGATCTACCAGGCGCTGGACAAGACCGGCGGCGTGGCCGAAGACCTGACGTGGGAGATGTTCCGCGACACACTGATC GAGCAGGCCGAGCAGGGCGTGGACTACTTCACCATCCACGCCGGCGTGCTGCTGCGCTATGTGCCGCTGACGGCCGATCG CGTGACGGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAAAACTTCCTGTATA CGCACTTCGACGAGATCTGCGAAATCATGAAGGCGTACGACGTGTCGTTCAGCCTGGGCGACGGCCTGCGCCCGGGTTGC ATCGCCGACTCGAACGACGCCGCGCAGTTCGGCGAGCTGCACACGCTGGGCGAGTTGACCAAGAAGGCGTGGGAGCACGA CGTGCAGGTGATGATCGAAGGCCCGGGCCACGTGCCGCTGCAGCGCGTGCAGGCCAACATGGACGAAGAGCTCAAGCACT GCTTCGAGGCCCCGTTCTACACGCTGGGCCCGCTGGTGACCGACATCGCCCCGGGCTACGACCACATCACCAGCGGCATC GGCGCGGCCAACATCGGCTGGTACGGCACGGCCATGCTGTGCTACGTCACGCCCAAGGAACACCTGGGCCTGCCGGACAA GGAAGACGTGCGCGAGGGCATCATCACCTACAAGATCGCCGCGCACGCCGCCGACCTGGCCAAGGGCTGGCCGGGCGCGC AGTTGCGCGACAACGCGCTGTCCAAGGCACGCTTCGAATTCCGCTGGGAAGACCAGTTCAACCTCGGCCTCGACCCGGAA AAGGCACGCGCCTTCCACGACGAGACGCTGCCCGCCGAGGGCGCCAAGATTGCCCACTTCTGCTCGATGTGCGGCCCGAA ATTCTGCTCGATGAAGATCACGCAGGAGGTGCGCGACTACGCGGCCTCGCTCGAATCCAACACCACCGCCGCTGTGCAGG GCATGGAAGAGAAGTCGATCGAGTTCCGCAAGGCCGGCGCAAAGATCTACACCTAA Protein sequence : MPQAKNAPATSFDSLQTELDQKFAYPASSKTYITGSRPDMRVPMRTIRQTATRTDQGEMLNPPVPVYDTSGPYSDPDVHI DLKAGLAPLRAKWIDERGDTVVLPGLSSEYGQARAHDPATAHLRFAQLTNPRRAKPGANVSQMHYARRGIITPEMEYVAL RESLNLQALQDKPEYRKLLKQHPGFSYGANLPQRPEDITPEFVRQEIAAGRAIIPANINHVELEPMAIGRNFRVKINGNL GNSAVTSSLAEEVEKMVWAIRWGADTIMDLSTGKHIHETREWILRNSPVPIGTVPIYQALDKTGGVAEDLTWEMFRDTLI EQAEQGVDYFTIHAGVLLRYVPLTADRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGC IADSNDAAQFGELHTLGELTKKAWEHDVQVMIEGPGHVPLQRVQANMDEELKHCFEAPFYTLGPLVTDIAPGYDHITSGI GAANIGWYGTAMLCYVTPKEHLGLPDKEDVREGIITYKIAAHAADLAKGWPGAQLRDNALSKARFEFRWEDQFNLGLDPE KARAFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYAASLESNTTAAVQGMEEKSIEFRKAGAKIYT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 80 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 73 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 73 |
