Gene Information

Name : RSPO_c02818 (RSPO_c02818)
Accession : YP_006030646.1
Strain : Ralstonia solanacearum Po82
Genome accession: NC_017574
Putative virulence/resistance : Unknown
Product : transposase; is2 insertion element repressor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2938533 - 2938922 bp
Length : 390 bp
Strand : -
Note : -

DNA sequence :
ATGACTAGCAGCAAACAAGAAGTGATGGAAGTGTTGACGGGGCCGGAGCGCCGCCGGCGGTGGTCGGTGGAAGAGAAGCT
GGCGATGGTCAGGGAGAGCTTCGAGCCGGGCAAGACGGTCTCGATGGTGGCGCGCCAGCACGGTGTGAACCCGAATCAGG
TGTTCCAGTGGCGCAAGCTGTACCAGGACGGCAGCCTGTCGGCGGTGAGCGCGGGCGAGGACGTGGTGCCGGCCTCGGAG
CTTGCTGAGGCGCTCAAGCAAGTCCGTGAACTGCAGCGCATGCTCGGCAAGAAGACGATGGAGAACGAGATTCTGCGCGA
AGCCGTGGAGTACGGTCGGGCAAAAAAGTGGATTGCGCGCTCGCCATCGTTGCCGGGGGACGACCAGTGA

Protein sequence :
MTSSKQEVMEVLTGPERRRRWSVEEKLAMVRESFEPGKTVSMVARQHGVNPNQVFQWRKLYQDGSLSAVSAGEDVVPASE
LAEALKQVRELQRMLGKKTMENEILREAVEYGRAKKWIARSPSLPGDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 1e-40 70
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 1e-40 70
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 1e-40 70
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 2e-40 70
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 2e-40 70
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-40 70
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 8e-41 70
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 5e-40 69
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 4e-41 69
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 2e-40 69
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 2e-40 69
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 2e-27 69
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 9e-28 67
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 9e-28 66
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-28 66
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 9e-28 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPO_c02818 YP_006030646.1 transposase; is2 insertion element repressor VFG0648 Protein 2e-41 70
RSPO_c02818 YP_006030646.1 transposase; is2 insertion element repressor VFG0622 Protein 7e-41 69
RSPO_c02818 YP_006030646.1 transposase; is2 insertion element repressor VFG0609 Protein 7e-41 69
RSPO_c02818 YP_006030646.1 transposase; is2 insertion element repressor VFG1733 Protein 2e-28 67