Gene Information

Name : RSPO_c02750 (RSPO_c02750)
Accession : YP_006030578.1
Strain : Ralstonia solanacearum Po82
Genome accession: NC_017574
Putative virulence/resistance : Unknown
Product : ISRSO8-transposase orfB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2866310 - 2867224 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGGCGTACATCGACCGCTATCGCGATGCGTACGGGGTCGAGCCCATCTGCAAAGTCTTGCAGATTGCCCCGTCTTG
CTATCGGCGCTACGCGGCCCAGCAACGCAACCCGGCGTTGCGCTGCAAACGCGCCCAACGCGACGATGTGCTCATCCCCG
ACATCAAGCGCATCTGGCACGGCAATTGGCAGGTGTATGGCGCCGACAAGGTCTGGAAGCAGATGATCCGCGAGGGCATT
CGTGTCGCCCGTTGCACGGTCGAGCGCTTGATGAAGCGCCAGGGCTTGCAAGGCGTGCGTCGTGGCAAGGTGGTGCGCAC
CACGACGCCTGATACTTCGGCGCCATGCCCGCTGGACCGGGTCCAGCGGATGTTCAAAGCCGAACGGCCCAACCAACTGT
GGGTGTCGGACTTCACCTACGTTTCGACCTGGCAGGGCTGGCTATACGTGGCGTTCGTCATCGACGTGTTCGCACGGCGC
ATTGTGGGCTGGCGCATGAGCCGCACCATGCGTAGCGACTTCGTGCTGGACGCCCTGGAGCAGGCTCTGTATGACCGCCA
ACCGGCCAGCTCCGATGCCTTGGTGCACCACTCGGACAGGGGCTCGCAATACCTATCCATTCGCTACACCGAGCGTCTAG
CCGAGGCCGGCATCGAACCCTCGGTCGGCAGCCGTGGCGATAGTTACGACAATGCGCTAGCCGAGACCGTCAACGGGCTG
TACAAAGCCGAGTTGATTCACCGCCGAGCGCCCTGGAAGTCCAGGGAATCCGTGGAACTGGCAACCCTGCAATGGGTGCA
CTGGTTTAACCACATCCGACTGCTTGAGCCCATCGGGTACATCCCGCCGGCTGAAGCTGAGGCAAACTACTGGCGGCAAC
TCGCCAGTCAGACCGCTGAGCCGGTCTCAACTTAA

Protein sequence : 
MKAYIDRYRDAYGVEPICKVLQIAPSCYRRYAAQQRNPALRCKRAQRDDVLIPDIKRIWHGNWQVYGADKVWKQMIREGI
RVARCTVERLMKRQGLQGVRRGKVVRTTTPDTSAPCPLDRVQRMFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARR
IVGWRMSRTMRSDFVLDALEQALYDRQPASSDALVHHSDRGSQYLSIRYTERLAEAGIEPSVGSRGDSYDNALAETVNGL
YKAELIHRRAPWKSRESVELATLQWVHWFNHIRLLEPIGYIPPAEAEANYWRQLASQTAEPVST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 3e-66 64
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-58 63
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-58 62
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 8e-75 61
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-74 61
Z1198 NP_286733.1 transposase Not tested TAI Protein 6e-76 61
Z1638 NP_287141.1 transposase Not tested TAI Protein 6e-76 61
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 3e-76 61
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-76 61
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-78 60
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 7e-78 60
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-77 60
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 3e-77 59
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-77 59
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-77 59
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-77 59
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-74 59
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-74 59
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-74 59
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-54 58
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 7e-74 57
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-53 45
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 1e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPO_c02750 YP_006030578.1 ISRSO8-transposase orfB protein VFG1602 Protein 4e-74 57