Gene Information

Name : ldcA (RSPO_c01901)
Accession : YP_006029736.1
Strain : Ralstonia solanacearum Po82
Genome accession: NC_017574
Putative virulence/resistance : Unknown
Product : muramoyltetrapeptide carboxypeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1978880 - 1979806 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence :
ATGACCACTGTCCGCCTGATCGCGCCCTCCGGTTATCCGAACGATTCCGCCATTGCCGAGCGCGGCTTGGTGTTCCTGCA
GGGGCAGGGCTGCACGGTGGTCAACCCGGCGTGCCTGGCGCGCCAGCACCAGCGCTTTGCCGGCGGCGAACTGGCGCGGC
TGGCCGATCTGCACCAGATCGGCACCGGCAGCGGCCAGGAGATCGCCATGGCCATCCGCGGCGGCTACGGGCTGACCCGG
CTGCTGGAGCGCATCGACTTCATCGGCATCGGCCGGCGCGCGCAGGCGACCGACGCCATCATCGTCGGCCACAGCGATTT
CACCGCGTTCTCGCTGGCCTACCTGGCCGCGACCGGCGGCGTGACTTTCGCCGGGCCGCACGTGTGCTCGGACTTCGGGC
TGGAGACGGTCGATCCGTTCATGGTCGAGCACTTCTGGGGCATTCTGCGCAATCCGGCCTACACCCTGCGCGTGGATGCG
CCGCAGTCCGGTGACTGCGCGCGCCCGGGCCGCTACGCCGGCACGCTGTGGGGCGGCAATCTGGCGATGCTGTGCAGCCT
GCTCGGCACGCCCTATCTGCCGGACATCCGCGATGGCATCCTCTTTGTCGAAGACATCAACGAGCACCCCTACCGCGTCG
AGCGGATGCTGCTGCAACTGCAGCAGGCCGGTGTGCTGGATGGGCAGCAGGCGCTGGTGCTGGGCGATTTCTCCGGCTAC
AAGACCACGCCCTACGATGCCGGCTACGACTTCGACGCCATGCTTGCCTACCTGGCCGAGCACCTGTCGATCCCGGTGGT
CAGCGGCCTGCCGTTCGGCCATTGTCCGACCAAGGCGACGCTGCCCATCGGCGCGCAGGCCGAGCTGGATGTGGACGCGG
ACGGCTTCACATTGCACCTGTCCGGCTATCCGACGTTGCGCGGCTAG

Protein sequence :
MTTVRLIAPSGYPNDSAIAERGLVFLQGQGCTVVNPACLARQHQRFAGGELARLADLHQIGTGSGQEIAMAIRGGYGLTR
LLERIDFIGIGRRAQATDAIIVGHSDFTAFSLAYLAATGGVTFAGPHVCSDFGLETVDPFMVEHFWGILRNPAYTLRVDA
PQSGDCARPGRYAGTLWGGNLAMLCSLLGTPYLPDIRDGILFVEDINEHPYRVERMLLQLQQAGVLDGQQALVLGDFSGY
KTTPYDAGYDFDAMLAYLAEHLSIPVVSGLPFGHCPTKATLPIGAQAELDVDADGFTLHLSGYPTLRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 7e-59 46