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Name : RSPO_c01546 (RSPO_c01546) Accession : YP_006029382.1 Strain : Ralstonia solanacearum Po82 Genome accession: NC_017574 Putative virulence/resistance : Unknown Product : isrso6-transposase orfb protein Function : - COG functional category : - COG ID : - EC number : - Position : 1610845 - 1611633 bp Length : 789 bp Strand : - Note : - DNA sequence : ATGAATCTGCAGCATGAACGGATTGACGGCCTATGCTCGCAACTCAAGCTCGACCGTATCGCCAGCGATTGGGGAGCGCT CGCGCAGCACGCTGCGACGACCGACGCGAGCCTGGCGGACTTCCTGGAGCAACTGCTGCAGGCCGAACTCGGCGCACGCG AGGAGCGCAAGCGCCAGACGCTCACGAAGCTCGCCTCACTGCCGGGTATCAAGACGCTGGAGCAATATGACTTCGGCTTC GCCAGCGGTGCCCCGCGAGCGCAGATACAGGAGCTGGCAAGCCTGGCGTTCATCGAGCGCGCCGAGAATGTCGTGCTGCT TGGGCCATCCGGCGTCGGCAAGACGCACATCGCCAGTGCGCTGGCCTACCGCGCGACGCAGGCGGGCATCAAGACGCGCT TCATCACGGCCGCCGACCTGATGATGCAACTGGCGATGGCGCGCCAACAGAACCGCTTGCGGGAGTTCTTCAACCGCGCG GTCATCGGACCGAGGTTGCTGGTCATCGACGAAATCGGCTATCTGCCGTTCGGGCGTGAAGAGGCAGACCTGTTCTTCAA CGTCGTCGCCAAGCGTTACGAGCGCGGCGCCATCGTGTTGACGAGCAACCTGCCGTTCACGCAGTGGGCTACGGCGTTCG CCGACGACCAGACGCTGACGGCGGCCATGCTCGACAGGCTTTTGCATCACGCACACATCGTGCAAATCACCGGCGAGAGC TACCGGCTCAAGGACAAGCGCAAGGCAGGGCAAACATCCACGCGGGCAAGCATGAAAGCAGCCGCGTGA Protein sequence : MNLQHERIDGLCSQLKLDRIASDWGALAQHAATTDASLADFLEQLLQAELGAREERKRQTLTKLASLPGIKTLEQYDFGF ASGAPRAQIQELASLAFIERAENVVLLGPSGVGKTHIASALAYRATQAGIKTRFITAADLMMQLAMARQQNRLREFFNRA VIGPRLLVIDEIGYLPFGREEADLFFNVVAKRYERGAIVLTSNLPFTQWATAFADDQTLTAAMLDRLLHHAHIVQITGES YRLKDKRKAGQTSTRASMKAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1094 | CAD33719.1 | ORF B protein | Not tested | PAI I 536 | Protein | 4e-61 | 60 |
| y1093 | CAC43411.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 2e-75 | 60 |
| y1093 | CAD66188.1 | transposase Orf B, insertion element IS100 | Not tested | PAI III 536 | Protein | 5e-76 | 60 |
| unnamed | CAB46598.1 | IS100 transposase | Not tested | HPI | Protein | 2e-75 | 60 |
| s0036 | CAD33774.1 | ORF B protein | Not tested | PAI I 536 | Protein | 2e-75 | 60 |
| YPTB1586 | YP_070114.1 | transposase/IS protein | Not tested | HPI | Protein | 2e-75 | 60 |
| y1093 | CAD42087.1 | OrfB protein of IS100 transposase | Not tested | PAI II 536 | Protein | 2e-75 | 60 |
| unnamed | CAA21402.1 | - | Not tested | HPI | Protein | 2e-75 | 60 |
| orfB | CAE85183.1 | OrfB protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 2e-75 | 60 |
| api84 | CAF28558.1 | putative transposase | Not tested | YAPI | Protein | 2e-75 | 60 |
| y2410 | NP_669717.1 | transposase/IS protein | Not tested | HPI | Protein | 2e-75 | 60 |
| aec58 | AAW51741.1 | Aec58 | Not tested | AGI-3 | Protein | 4e-75 | 60 |
| YPO1901 | YP_002346891.1 | transposase/IS protein | Not tested | HPI | Protein | 2e-75 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RSPO_c01546 | YP_006029382.1 | isrso6-transposase orfb protein | VFG1460 | Protein | 3e-61 | 60 |
| RSPO_c01546 | YP_006029382.1 | isrso6-transposase orfb protein | VFG1515 | Protein | 1e-75 | 60 |
| RSPO_c01546 | YP_006029382.1 | isrso6-transposase orfb protein | VFG1663 | Protein | 3e-76 | 60 |
| RSPO_c01546 | YP_006029382.1 | isrso6-transposase orfb protein | VFG1627 | Protein | 1e-75 | 60 |
| RSPO_c01546 | YP_006029382.1 | isrso6-transposase orfb protein | VFG1606 | Protein | 1e-75 | 60 |
