Gene Information

Name : RSPO_c01524 (RSPO_c01524)
Accession : YP_006029359.1
Strain : Ralstonia solanacearum Po82
Genome accession: NC_017574
Putative virulence/resistance : Unknown
Product : isrso14-transposase orfb protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1591633 - 1592457 bp
Length : 825 bp
Strand : -
Note : -

DNA sequence :
ATGACCGAACGCGCCATGGGTGTCACCCGGGCCTGCGGGCTGGTGGGGATTTCGCGCTCGCTGTTCCACTACGAATCGCG
CCGCCGAATTGACGACGAAGTGCTGACTGGTCGGATGGTGGCCATCGCCGCGCAGAAGCGTCGCTACGGCTATCGCCGGA
TTCACGTGCTGTTGCAACGGGAGGGCTGGCTGGCAAACCACAAACGCATCTGGCGGCTGTACAGCAAGGCGGGACTGAGC
GTGCGCAAGCGGCGACGCAAACGCATTGCTGCTGTCGAGCGCAAGCCGCTGCCGGTGCCAACAGGGTCGAACCAGAGCTG
GTCGATGGACTTCGTCTCCGACGGGTTGGCGTATGGTCGGCGGTTTCGATGCCTGAATGTGGTCGACGATTACACGCGGG
AGTGCCTGGTCATCGAGGTTGACACCTCGTTGCCGGGCCTTCGGGTTAAGCAAGTGCTTGAACGGCTGAAGGAGATGCGA
GGCTTGCCCGCTTCCATCACGGTGGACAACGGCCCGGAGTTCGCTGGTAAGGTGCTGGACGCATGGGCCTACGAAGCAGG
TGTCACGCTATCGTTCATCCGGCCCGGCAAGCCCGTGGAGAACGCCTACATCGAGAGCTTCAACGGGCGGTTCCGTGATG
AATGCCTGAACGAGCACTGGTTCGTCTCAATGCGCCACGCCAGGCAACTGATTGAGGAATGGCGTATCGAGTACAACACC
GAGCGGCCTCACAGCTCGCTCGGCTACCTGACCCCGGTGCAGTTCGCCCAGGGGAGCAAGCAGAAAGAGTTTTTAACCTC
GGACTCCACCTGCGTTTCGCACTAA

Protein sequence :
MTERAMGVTRACGLVGISRSLFHYESRRRIDDEVLTGRMVAIAAQKRRYGYRRIHVLLQREGWLANHKRIWRLYSKAGLS
VRKRRRKRIAAVERKPLPVPTGSNQSWSMDFVSDGLAYGRRFRCLNVVDDYTRECLVIEVDTSLPGLRVKQVLERLKEMR
GLPASITVDNGPEFAGKVLDAWAYEAGVTLSFIRPGKPVENAYIESFNGRFRDECLNEHWFVSMRHARQLIEEWRIEYNT
ERPHSSLGYLTPVQFAQGSKQKEFLTSDSTCVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 9e-51 55
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-49 53
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-66 51
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-47 43