|
Name : SerAS13_0711 (SerAS13_0711) Accession : YP_006023590.1 Strain : Serratia sp. AS13 Genome accession: NC_017573 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 799058 - 800506 bp Length : 1449 bp Strand : - Note : PFAM: Type II secretion system protein E; KEGG: spe:Spro_0777 hypothetical protein DNA sequence : ATGAGCATTGGTATCAGCGATGAAATTCACGCCCTGTGCCAGCGCTACCAGGCGCTGGCCCTCAGCGAAGACGACGACAG CCTGACCGTTGCCCTGAACGCTGAAGTACCGCAGGAGCTGCTGCCGGCCCTGCGTTTCGCCACCGGCAAACGTATTCATC TTGAGCAGTGGCCTGCGGCCCGACTGGAGCTGGAACTGAACCGCCGGCAAATGCAGGGTGAAAGGCTTGGACAAAGCGCG CCGGAAGCCGAGCCGGACGCATCCTCATTAAATGACGACAGTGACGCGCCCGTAGTACAGTTTATCAACCAAACTCTGCG CATCGCCATACAACGACGCGCTTCGGACATTCATTTCGAACCTTATCTGCAGACTCTGCGTATCCGGCTGCGCATCGACG GCGTGTTGCAGGCCATAGCGTCACCGCCTTTCCCCCTGGCCGCACGACTTATCGCCCGGCTGAAGATCATGGGGCAGTTG GATATCGCCGAGCGCCGGCTGCCGCAGGATGGGCAGCTCAGCGTACAACTGGATAACGCCAGTTATTCAATGCGTATCGC TACCTTGCCGACACTGCACGGTGAAAAAGTGGTGCTGAGGATCCTGCAAACCGAACGCCAGGAGCTGCCGTTGGATCGAT TAGGCATGAGCCAAACGGCGCTGGCGCAGTATGCTGAGGCACTGTCCTGCCCCCAGGGCATGATCCTGGTCACAGGCCCG ACCGGCAGCGGTAAAACCGTCACGCTGTACAGCGGCCTGCGACAATTGAATGACGCGCAAAGCAATTTGTGCAGCGTCGA GGACCCGATTGAAATTCCGCTGTTCGGCGTCAACCAGACCCAGATAAACCCCAAAACCGAGCTGGATTTTTCTCGCGTGT TGCGCGCCTTGTTGCGCCAGGATCCGGACGTCATCATGATCGGTGAGATCCGCGACCGGGAAACGGCGGAAATCGCAGTG AAAGCGGCTCAAACCGGTCATCTGGTCCTCTCGACGCTGCACACCAACTCCACCAGCGAAACCTTGACGCGCCTGACCCA TATGGGTATTCCGGGTTATCTGATCGCCGCCTGTCTGAAGCTGGTCATCGCCCAACGGCTGGTGCGCAAGCTGTGCAGTC ACTGTCGCTATCAACAGAACCTGCCCGTTCACTTTCCCACCGCCATTTGGGCCACCCCCCTGTTGCCTTGGCAGGCTGAC GGCTGCGAACACTGCTTTAGCGGTTACTACGGCCGCACTGGGGTCTATGAGTTGCTGATGATCACTCCAGAAGTCCAAGC CGGTCTGCTGCAAGGCGCAGCTCCCGGTCAACTGGCCGATATTGCCCGACAACAAGGGCAGATAACGCTGCTGCAAGCCG GATTAACGCTGGTTTCTCAGGGCTTCACCTCGTTGGAAGAGGTATATCGCATTGTCGGCATCACCGCCGAAAGCGGAGCG GCACCGTGA Protein sequence : MSIGISDEIHALCQRYQALALSEDDDSLTVALNAEVPQELLPALRFATGKRIHLEQWPAARLELELNRRQMQGERLGQSA PEAEPDASSLNDDSDAPVVQFINQTLRIAIQRRASDIHFEPYLQTLRIRLRIDGVLQAIASPPFPLAARLIARLKIMGQL DIAERRLPQDGQLSVQLDNASYSMRIATLPTLHGEKVVLRILQTERQELPLDRLGMSQTALAQYAEALSCPQGMILVTGP TGSGKTVTLYSGLRQLNDAQSNLCSVEDPIEIPLFGVNQTQINPKTELDFSRVLRALLRQDPDVIMIGEIRDRETAEIAV KAAQTGHLVLSTLHTNSTSETLTRLTHMGIPGYLIAACLKLVIAQRLVRKLCSHCRYQQNLPVHFPTAIWATPLLPWQAD GCEHCFSGYYGRTGVYELLMITPEVQAGLLQGAAPGQLADIARQQGQITLLQAGLTLVSQGFTSLEEVYRIVGITAESGA AP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-73 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-73 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS13_0711 | YP_006023590.1 | type II secretion system protein E | VFG0112 | Protein | 5e-94 | 50 |
| SerAS13_0711 | YP_006023590.1 | type II secretion system protein E | VFG2426 | Protein | 2e-77 | 47 |
| SerAS13_0711 | YP_006023590.1 | type II secretion system protein E | VFG1880 | Protein | 3e-89 | 47 |
| SerAS13_0711 | YP_006023590.1 | type II secretion system protein E | VFG0233 | Protein | 2e-78 | 47 |
| SerAS13_0711 | YP_006023590.1 | type II secretion system protein E | VFG0182 | Protein | 2e-76 | 46 |
| SerAS13_0711 | YP_006023590.1 | type II secretion system protein E | VFG2048 | Protein | 3e-74 | 44 |
