Gene Information

Name : SerAS13_0560 (SerAS13_0560)
Accession : YP_006023439.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradation operon regulator HpaR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 627083 - 627535 bp
Length : 453 bp
Strand : -
Note : TIGRFAM: Homoprotocatechuate degradation transcriptional regulator HpaR; PFAM: HTH transcriptional regulator, MarR; KEGG: spe:Spro_0624 MarR family transcriptional regulator; SMART: HTH transcriptional regulator, MarR

DNA sequence :
ATGCATGAATCCTTAACCATTGCCCTGTTGCAGGCGCGTGAAACCGCCATGGGGTTTTTCCGCCCGATCCTGAAAAGCCA
CAATCTGACGGAACAGCAGTGGCGCATCATCCGCGTGCTGGCCAACAGCCGTTCGATTGAATTCCACGAACTGGCGGCGG
AGACCTGCATCCTGCGCCCCAGCCTGACCGGCATTTTGTCGCGCATGGAGCGCGATAAGCTGATTTTCCGCCTGAAGCCG
GTCAACGATCAGCGCAAGCTGTACGTTTCGCTGACCCAGCCGGGCCAGGAGCTGTACGACGTGGCACGCCATCAGGTGGA
ACAGGGTTACCGCGAAATTGAAGCCGCGTTTTCGCAGCAGAAGATGGATCAACTGATGACGTTGCTGGACGAGCTGATCA
CCCTGGGCGACAAACTGCCGGCCAACGTGACGGCCCATCCCACCCAGAAATGA

Protein sequence :
MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRPSLTGILSRMERDKLIFRLKP
VNDQRKLYVSLTQPGQELYDVARHQVEQGYREIEAAFSQQKMDQLMTLLDELITLGDKLPANVTAHPTQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 4e-51 77

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS13_0560 YP_006023439.1 homoprotocatechuate degradation operon regulator HpaR BAC0505 Protein 2e-32 51