Gene Information

Name : SerAS13_0473 (SerAS13_0473)
Accession : YP_006023353.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Unknown
Product : alpha,alpha-phosphotrehalase
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.93
Position : 518362 - 520026 bp
Length : 1665 bp
Strand : -
Note : SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Alpha,alpha-phosphotrehalase; KEGG: spe:Spro_0528 trehalose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic region

DNA sequence :
ATGAGCAATCCAATCCCCTGGTGGCAGAACGGTGTCATCTACCAAATCTATCCGAAGAGTTTTCAGGACAGCACCGGTAA
CGGCTACGGCGATCTGGCCGGTGTGACCCAGCGGCTGGACTATCTGCAGGAACTGGGCGTCGACGCCATCTGGCTGACGC
CGGTGTATGTCTCCCCGCAGGTGGACAACGGTTATGACGTGGCGGATTACTGCGCCATCGATCCGGCCTACGGCACCATG
GAGGATTTCGACAGTCTGATCGCCGCCGCCCACCAGCGCAGCATCCGTATCGTGATGGATATGGTGTTCAACCATACCTC
GACCGAACACCCGTGGTTCCAGGCCTCGCAAGACCCTGACAGCCCGTTCCGCCAGTTCTATGTCTGGCGCGATGGCGAAG
GCGATGCGTTGCCGAACAACTGGCGTTCCAAGTTCGGCGGCAATGCCTGGCAGTGGCACGCCGACAGCGGCCAGTATTAC
CTGCACCTGTTCGCCACCGAACAGGCGGACCTCAACTGGGAACACCCACCGGTGCGCGAAGAGCTGAAAAAAGTGTGTCA
GTTCTGGGCGGACAAGGGCGTCGACGGCCTGCGTCTCGACGTGATCAACCTGGTCTCCAAACAGCAGGATTTTCCTTCCG
ATCCTCAGGGCGACGGCCGCCGTTTCTACACCGATGGCCCGCGCATTCACGAATTCCTGCAAGAGATGAGCCGTGACGTG
TTCCAGCCGCGCGGCCTGATGACCGTCGGCGAAATGTCCTCCACCACGCTGGAACATTGCCAACAGTATGCGGCGCGCAG
CGGCGAAGAGCTGTCGATGACCTTCAACTTCCACCACCTGAAAGTGGACTACGCCGGTGGGGAAAAATGGACGCTGGCGG
CGCCGGACTACGTCGAACTGAAGCAGATTTTCCGCCACTGGCAGCAGGGCATGCATAACCGTGCCTGGAATGCGCTGTTC
TGGTGTAACCACGATCAGCCCCGCATCGTTTCACGCTTCGGCGATGAGGGCGAACTGCGGGTGCCGGCCGCCAAGATGCT
GGCCATGGTGCTGCACGGTATGCAAGGCACGCCGTATATTTATCAGGGCGAAGAGATTGGCATGACCAACCCGGGCTTTA
GCGCCATCGGGCAGTATCGCGATGTGGAAAGCCTGAACATGTATGCCGAACTGAGCGCCCAGGGTAAGAGTGACGCCGAG
CTGCTGGCGATCCTGGCCAGTAAATCGCGCGATAACGGCCGCACGCCGATGCAGTGGAGCGCCGCGCCGAACGCCGGTTT
CACCCAAGGCACACCCTGGATTGGCTGTGCGGCAAACTACCCGCAAATCAACGCCGAAGCGGCGCTGGCCGATCGGGATT
CGGTGTTTTACGCCTACCGCCAGCTGATCACCCTGCGCAAGCAGTATCCGCTGCTGACCCACGGCGACTATCAGGATCTG
GCGCCTGAGCACCCGGCGCTGTGGTGCTACCAGCGTAGCTGGAACGGACAGCGTCTGCTGGTGGTCGCCAACCTGAGCCG
CGAACCGCTGGCCTGGGAAGCCGAAGGCGTGGAGCCCTCTAACCAGTGGCGCCCGCTGATGGGCAACTACGCCGATGCGG
CGGACCAACCGCAGGCAATGACCCTGCGGCCGTTCGAAGCGGTATGGTGGCTGCTGGAGGACTAA

Protein sequence :
MSNPIPWWQNGVIYQIYPKSFQDSTGNGYGDLAGVTQRLDYLQELGVDAIWLTPVYVSPQVDNGYDVADYCAIDPAYGTM
EDFDSLIAAAHQRSIRIVMDMVFNHTSTEHPWFQASQDPDSPFRQFYVWRDGEGDALPNNWRSKFGGNAWQWHADSGQYY
LHLFATEQADLNWEHPPVREELKKVCQFWADKGVDGLRLDVINLVSKQQDFPSDPQGDGRRFYTDGPRIHEFLQEMSRDV
FQPRGLMTVGEMSSTTLEHCQQYAARSGEELSMTFNFHHLKVDYAGGEKWTLAAPDYVELKQIFRHWQQGMHNRAWNALF
WCNHDQPRIVSRFGDEGELRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPGFSAIGQYRDVESLNMYAELSAQGKSDAE
LLAILASKSRDNGRTPMQWSAAPNAGFTQGTPWIGCAANYPQINAEAALADRDSVFYAYRQLITLRKQYPLLTHGDYQDL
APEHPALWCYQRSWNGQRLLVVANLSREPLAWEAEGVEPSNQWRPLMGNYADAADQPQAMTLRPFEAVWWLLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 1e-126 43