Gene Information

Name : SerAS13_4347 (SerAS13_4347)
Accession : YP_006027163.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Unknown
Product : Polypeptide-transport-associated domain protein ShlB-type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4687515 - 4689230 bp
Length : 1716 bp
Strand : -
Note : PFAM: Polypeptide-transport-associated, ShlB-type; Haemolysin activator HlyB; KEGG: epy:EpC_28900 hemolysin activator protein

DNA sequence :
ATGCGCGTCTCTGCTTATTCTTCGCTCAGCCTTGCTGTGCGCAAGGGGTGTATTCCATTTGGCTCTGTTGTCTTGCCGCT
GTTTATATTCAATCAACCGGTTCTGGCGGCAGCGCCAAATGGCGATCAGCTGATCATACAGCAGCAGAGGCAAAAAGCGC
TGGAACAGCAGCTAACCCCCCCGACGCCGGATGTGCGGCTGTCGCCGCCTTCGTCCGGTTTTGGCCGCATTGCGTTCCCG
CAGGAAAAACCCTGCTTCCCTATCGAACAGGTCGTTCTGACCGGCCAGGACAAACTCCCGCATTGGCTGCCGTTGCAGCG
CATTGCCACCCAGGCGCAGGGCCAGTGCCTGGGCGGGCAGGGCATCAACCTGTTGATGAGCACCCTGCAGAACCGACTGG
TGGATAGCGGCTATATCACCACGCGCGTGCTGGCGCCGACGCAGGATCTGAAAAGCGGCAAGCTGCGGCTGGTGGTAGTG
CCCGGCTATGTGCGCCAGGTGAAACTGACGCCGGACAGCGGCCGCTACATTCAACCCTACAGCAGCTTCCCGGCTCATGC
CGGCAACTTGCTGGACTTGCGTGATATCGAGCAGGGGCTGGAAAACCTGCAGCGCCTGCCGACGGTGCAGGCCAACATGG
AAATCATCCCCGGCGAGCAGCCCGGCGAAAGCGATATCGCCCTGAGCTGGAAGCAAGAACGCATGTGGCGCGTTGGCGCC
TCGCTGGATGACTCCGGCACCAAGAGCACCGGTCGCTATCAGGGCGGCCTGACGCTATCTTTGGATAACCCGTTCTCGCT
CAGCGATCTGTTCTACATCTCCGGCACCACTGACCTGCAAAACCAGGGCGGCAGAGGCACCAAAAACATCACCGGCCATT
ATTCGGTACCGTTCGGCTACTGGATGGCCGGGGTGACCGCCAACAGTTATGACTATCACCAGACCATCGCCGGGCAGAAT
CAGGATTACCGCTACAGCGGCAAGAGCAAGAACCTGGATTTCCAGCTCAGCCGGGTGCTGCACCGTAACGGCAGCCAGAA
AACCACGCTGACCTATGACGTGTTGGCGCGCGAATCCAGCAACTACATCAACGATACCGAAGTGGAAGTGCAGCGCCGCC
GCACCTCCGGCTGGCGGCTGGGCTTGCAGCACCGCCATTACATCCAGCAGGCCACGCTGGATGCCGGCGTCAGCTATCAG
CGCGGCACTCGCTGGTTCGGCGCATTGCCTGCGCCGGAAGAGACCTTTGGCGAGGCCACGGCGCTCAGCAAAATCGTGCA
GCTCAACGCCCAGCTTGACGTGCCGTTCAGCCTGTTCAGCCAGAACTTCAGATACAACGTGCAGTACCAGCGCCAGATCA
GCGATACCCCGCTGACGCCGCAGGATCAGTTTGCTATCGGCAACCGCTGGACGGTACGCGGCTTTGACGGCGAACGCACC
CTGAACGCCAATCACGGCTGGTTCGTGCGCAACGATCTGGCCTGGCGCACGCCGCTGCCGGGGCAAGAACTGTACCTGGG
GGCTGACTATGGCGAAGTGGGCGGTTACGGCACCGATTACCTGGTCGGGCAACACCTGGCGGGTGGGGTGGTCGGCCTGC
GCGGTTACGCCTTCAAGGTGGGTTACGACCTGTTCGCCGGCGTGCCGTTCTCCAAACCGGACGGCTTCAGCACCAGCCCG
GTGACGCTGGGCTTTAACCTGAGCTGGAACTACTGA

Protein sequence :
MRVSAYSSLSLAVRKGCIPFGSVVLPLFIFNQPVLAAAPNGDQLIIQQQRQKALEQQLTPPTPDVRLSPPSSGFGRIAFP
QEKPCFPIEQVVLTGQDKLPHWLPLQRIATQAQGQCLGGQGINLLMSTLQNRLVDSGYITTRVLAPTQDLKSGKLRLVVV
PGYVRQVKLTPDSGRYIQPYSSFPAHAGNLLDLRDIEQGLENLQRLPTVQANMEIIPGEQPGESDIALSWKQERMWRVGA
SLDDSGTKSTGRYQGGLTLSLDNPFSLSDLFYISGTTDLQNQGGRGTKNITGHYSVPFGYWMAGVTANSYDYHQTIAGQN
QDYRYSGKSKNLDFQLSRVLHRNGSQKTTLTYDVLARESSNYINDTEVEVQRRRTSGWRLGLQHRHYIQQATLDAGVSYQ
RGTRWFGALPAPEETFGEATALSKIVQLNAQLDVPFSLFSQNFRYNVQYQRQISDTPLTPQDQFAIGNRWTVRGFDGERT
LNANHGWFVRNDLAWRTPLPGQELYLGADYGEVGGYGTDYLVGQHLAGGVVGLRGYAFKVGYDLFAGVPFSKPDGFSTSP
VTLGFNLSWNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S1 AAQ19124.1 putative hemolysin activator HlyB Not tested PAI I CL3 Protein 0.0 73
NMB1762 NP_274762.1 hemolysin activation protein HecB Not tested IHT-C Protein 5e-92 43