Gene Information

Name : SerAS13_4093 (SerAS13_4093)
Accession : YP_006026914.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4377038 - 4377235 bp
Length : 198 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: spe:Spro_3885 phage transcriptional regulator AlpA

DNA sequence :
ATGAATCAATCTTTAATTCGTCTACCAGATGTCCAGCGCCGCACTGGCTACAGCAAGGCATGGATCTATCGCCTCATGTC
GGAGGGAAAATTTCCTGCATCAGTAAAAATTGGCACTCGTGCCATTGCCTTCGTTGAAAGTGAAGTTGATGAATGGGTCA
ATCAGCGCATTATTGAAGCCCGTAGGGAGGTCATCTGA

Protein sequence :
MNQSLIRLPDVQRRTGYSKAWIYRLMSEGKFPASVKIGTRAIAFVESEVDEWVNQRIIEARREVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-07 52
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 52
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-07 52
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 8e-09 48
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 5e-06 47
unnamed CAA21398.1 - Not tested HPI Protein 1e-07 46
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 7e-08 46
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 8e-09 46
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 8e-09 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS13_4093 YP_006026914.1 phage transcriptional regulator AlpA VFG1118 Protein 1e-07 52
SerAS13_4093 YP_006026914.1 phage transcriptional regulator AlpA VFG1141 Protein 2e-09 46