|
Name : SerAS13_3963 (SerAS13_3963) Accession : YP_006026785.1 Strain : Serratia sp. AS13 Genome accession: NC_017573 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : - COG ID : - EC number : 4.1.1.18 Position : 4228997 - 4231153 bp Length : 2157 bp Strand : - Note : KEGG: spe:Spro_3773 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal DNA sequence : ATGAATATCATCGCAATCATGAGCCCAACGGGCGTCTATTACAAAGATGAGCCTATTCGTGAGCTGCACACTGCATTGGC TACGATGGGTTTCCAGTTGGTTTACCCGAAGAATGGCGGCGATCTGCTGAAGCTGATCGAGGCCAATGCGCGTATTTGCG GAGTGATTTTCGACTGGGACGACTACAGCCTGGAGCTGTGCAGCGAAATTAACGAGCTGAATGAATATCTACCGCTATAT GCGTTTATCAACCAGTATTCCACCTTCGACGTCAGTCTTCATGAAATGCGCATGGTGCTGTATTTCTTTGAGTATGGCTT GAATGCGGCAGATGATATTGCGCAGCGTATCCAGCAATACACCGCAGAATATATCGACACCATTACGCCGCCCTTAACCA AGGCACTATTCAACTACGTGCGCGAGGGCAAATACACCTTTTGCACCCCAGGGCATATGGCCGGCACTGCCTTCCAGAAA AGCCCGGTTGGCTGCCTGTTTTACGATTTTTTCGGTGCGAACACCTTAAAAGCCGACGTCTCCATATCGGTGACCGAACT GGGTTCGCTGCTGGACCATACCGGCCCGCATCTGGAGGCCGAAGAGTATATTGCGCGTACCTTTAACGCCGAGCAGAGCT ATCTGGTGACCAACGGCACCTCCACCGCCAACAAGATTGTCGGCATGTATTCGGCCCCGGCAGGCAGCACGGTGTTGATT GACCGCAACTGCCATAAATCGCTGTGTCATCTGCTGATGATGAGCGATATCGTCCCGATCTACCTGCGTCCGCTGCGTAA CGCCTACGGCATTCTTGGTGGCATCCCGCAGCATGAATTTACCCATGAGAGCATTGCCGGTCGAGTCGCCGCCACCGCGA ATGCCAGTTGGCCGGTACATGCGGTGATTACCAACTCAACCTATGACGGCCTGCTGTATAACACCGATTACATCAAGCAG ACGTTGGACGTGCCATCAATCCATTTTGACTCCGCCTGGGTACCCTATACCAACTTCCATCCGATCTACGAAGGCAAGAG CGGCATGAGCGGCGAGCGCACGCCCGGCAAGGTGATCTACGAAACGCAGTCCACGCACAAGCTGCTGGCGGCATTCTCGC AGGCCTCGATGATTCACATTAAAGGCGATTACGACGAAAGCACCTTTAACGAAGCCTATATGATGCATACCACCACTTCG CCGAACTACGGCATTGTGGCGTCGATGGAGACTGCCGCCGCGATGCTGCGCGGCAATCCTGGCCGGCGGTTGATTAACCG CTCGGTAGAGCGTGCATTGCATTTCCGTCGTGAGGTGCAGCGGTTGCGGGAGGAGAGCGATAGCTGGTTCTTCGATATCT GGCAGCCTGAAGAGATCGACGAGGCGCAATGCTGGCCGTTGAACCCGGACGATAATTGGCATGGGTTTGGCAATACCGAC AGCGATCACATGTATCTCGATCCGATCAAAGTGACGATCCTGACGCCGGGAATGAACGAACTGGGTACGCTGGAGGGGAG CGGGATCCCGGCGGCGCTGGTGGCGAAATACCTGGACGAGCGCGGCATCGTGGTGGAAAAAACCGGGCCTTATAATCTGC TGTTCCTGTTCAGTATCGGCATTGATAAAACCAAGGCGATGAGCCTGCTGCGTGGCCTGACCGATTTTAAACGCGCTTAC GATCTTAATCTGCGGGTGAAGAACATGCTGCCGGATCTGTATGCGGAGGATCCTGATTTCTATCGCAATATGCGCATTCA GGATCTGGCAGCCGGGATCCACCGGTTGATCTGCCTGCACGATCTGCCGCGGCTGATGCTGCGGGCGTTCGACGTGCTGC CGGAAATGAAGCTGACGCCACACCAAATGTTCCAGCAGCAGGTACGTGGCAATGTGGAAACCTGCGAACTGGATCAACTG GTGGGCAAGGTGGCGGCCAATATGATCCTGCCTTATCCACCAGGCGTGCCGTTAGTGATGCCGGGTGAGATGATCACCGA GGAGAGCCGTGCGGTGCTCGATTTCTTGCTGATGCTGTGTTCTATCGGCGAGCGTTATCCCGGCTTTGAAACCGATATCC ACGGTGCGAAATTGACCGAGGATGGGCGTTATCTGGTGAAGGTACTGAAAACGCCGCCGCCCGATCTCAACGTTTGA Protein sequence : MNIIAIMSPTGVYYKDEPIRELHTALATMGFQLVYPKNGGDLLKLIEANARICGVIFDWDDYSLELCSEINELNEYLPLY AFINQYSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQYTAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQK SPVGCLFYDFFGANTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQHEFTHESIAGRVAATANASWPVHAVITNSTYDGLLYNTDYIKQ TLDVPSIHFDSAWVPYTNFHPIYEGKSGMSGERTPGKVIYETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTS PNYGIVASMETAAAMLRGNPGRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLNPDDNWHGFGNTD SDHMYLDPIKVTILTPGMNELGTLEGSGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIGIDKTKAMSLLRGLTDFKRAY DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAAGIHRLICLHDLPRLMLRAFDVLPEMKLTPHQMFQQQVRGNVETCELDQL VGKVAANMILPYPPGVPLVMPGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKTPPPDLNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 76 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS13_3963 | YP_006026785.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 64 |
