Gene Information

Name : SerAS13_0340 (SerAS13_0340)
Accession : YP_006023220.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 385998 - 387011 bp
Length : 1014 bp
Strand : +
Note : PFAM: Integrase, catalytic core, phage; KEGG: spe:Spro_4117 integrase family protein

DNA sequence :
ATGCATAAATCGCGAGTTATGGATTGGGACACCTTGCTCGAAGAGTATTTTTTCTCAAAGGTGTTACGCCCGGAAACTGA
AAGGAGCTATCGCAGAGTGGTTGCTGTTTTCAGGAGATTTATAGGGTATGGCACGTTACCGGATGCAGTCACGAACCGAG
AACTGATTTTGTGGCGTAGAGACATGTTGGGAAGGGGTTTAACAACAAGTACGTGGAATAACAAAGCTCGCCATTTACGT
GCGATTTACAACCAGGGGATGAAGAAAAAATGGCTCAACGTAGAGGAAAATCCGCTAAATGAAACGCAAGTGCCGCCGGG
TAACAAGCGTAAAAAAACACTGAACCGTGACCAGTTGGTTAAAGTGAATCTGGTATTAGAACAATTTGAAGAACGCGAAA
AATTAAGGGTAGGTAAATGTCGTCCTTGTGCGCTCTTTCCTGTGTGGTATTGGCGGACTGTCATAGACGTCTTGCGTTCG
ACTGGGATGCGGCAAAACCAGTTATTACATATACGACTAATGGATGTAGATCTGGAGGCAAACTCGATGTTGCTGTGTAA
AGAAGGCAGTAAAACGCATCGCGAGTGGTTAGTTCCTATCGTGAGCTTTATCCGTGAACGGATGCGAATACTTGTTAATC
GCGCGATAGCACAGGGGGCCGAACCGGCAGATTATCTGTTCGATGTAGCACGATTCTTGAATCCATTGGGTGAGGTTGAC
TCAGAGCCTGCAATCCAACCTGTTCGCTCATTCTTCACCAGGCTGACGAAAGAGTGTGGCTTTAAGGTGAGTCCGCATCG
ATTCAGACATACCCTGGCTACCGAAATGATGAAGTCACCCGATCGTAATTTGGCAATGGTTAAAGGTTTGCTTGGACATC
GGAGCGTCAGCACAACAATGGAATATGTCGAACTGGATTTAAAGGTTACCGGTCAAGCGTTAGAGAATGAGCTGTCACTG
TATATGGATGTGATACCAGCGCGTGAAAGTGAGGCCAGACTCGTCTTGACATGA

Protein sequence :
MHKSRVMDWDTLLEEYFFSKVLRPETERSYRRVVAVFRRFIGYGTLPDAVTNRELILWRRDMLGRGLTTSTWNNKARHLR
AIYNQGMKKKWLNVEENPLNETQVPPGNKRKKTLNRDQLVKVNLVLEQFEEREKLRVGKCRPCALFPVWYWRTVIDVLRS
TGMRQNQLLHIRLMDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVNRAIAQGAEPADYLFDVARFLNPLGEVD
SEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLGHRSVSTTMEYVELDLKVTGQALENELSL
YMDVIPARESEARLVLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3686 YP_001402640.1 phage integrase Not tested YAPI Protein 4e-65 49
api95 CAF28569.1 putative phage integrase Not tested YAPI Protein 3e-65 49
YE3450 YP_001007614.1 phage integrase Not tested YAPI Protein 4e-66 48
STY4666 NP_458745.1 probable phage integrase Not tested SPI-7 Protein 9e-70 45
t4357 NP_807950.1 phage integrase Not tested SPI-7 Protein 9e-70 45
PMI2549 YP_002152268.1 phage integrase Not tested Not named Protein 2e-63 43