Gene Information

Name : SerAS13_0300 (SerAS13_0300)
Accession : YP_006023187.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 347868 - 349352 bp
Length : 1485 bp
Strand : +
Note : TIGRFAM: integrating conjugative element protein, PFL_4711 family; KEGG: spe:Spro_0350 hypothetical protein

DNA sequence :
ATGAATAACACGATGAATAAACGCACTTTCCGAGGCCGGCGCAGCCTGCTGTCTCTGTGGGTTGTCAGCAGTCTGATGCT
GGTCGGCATGAACGCGCACGCTGACGACAATGATGATAACGGTACTTTGTTTGGCATTTCGTTGCCCCAGGTGAATGACA
GCAATATCGGTTACGGGAAGAGCGCCAGCGGCGCGGTCTCGGACAAGCTGTTTTATTCCCTGGGCGGTGGCTCGGTGATC
TCACAGCCGGCGACACGCGGCAACATGCAACGCCTGGGCATGAACCTGGGCTGGAGCTCGGATTTGATGTGCGGCAACTT
CGATCTGAAAACGACGATCGGTAATCAGCTTAATGGTGTCACCGACGGCTTCAAGAACCTGATGGGCAGCGTTATCCAGG
GCGCTACTGGAGCGGTGGCCAGTTTGCCGGCGATGGCTATCCAGCGTGCCAACCCGGGGTTGTATGAAATGCTGACCAAC
GGAGTGCTGCAGGGTGGCGTCGCGTTCGACAAGGCGCAGTTGAACTGTCAGAACCTCTCGAAGCGCATGATGGACATGGC
GGATACCGGCGGCTGGAGTCAGGCGGCAGCGATGGAGGAAGCCAAGAGCCTGGTCAATAACGGGGACGCGGATGCGGTGC
GATCGATGAATGCCACGGAGAAAGTGACCGGGCAATCCGGCCAGACCTGGATCGGCGGCCAGAAGCGAGGTGGCGCCGGT
CAGCCGGCCATCAAGCCAACGCACGACCTGGCGGCCGCCGGCTACAACATGATGAATGCGTTGCCGGTCACCAGTACCTC
TAGTGTATCCGGCAGCAGCTGCACCGGCGGCTCCTGTGCCAAATATGCCAGCAGCGAAGAAGCGGCCGCTGCAGTGGTGA
AGGTGTTGGGGGATTCCTCGCTGCGTACCTGTAAGGATGCGGCGCAATGTACCAGTGGTGAAGGGAGTGAACAGCCCGGC
AGTACCGTGGCCGGCACCGGTTTTGCGCCGATGCTGGAAGAGGCGACAAAAGCAAATAACGAGCAGTTGGCCAAACTGGT
CAACGGGGCAGAGAAACCCACCACTGCCAACCTGGCCAAGCTCAAGACGGGCAGCCTGGCGGTGACCGCCGGGGTTATCA
AGGCGCTGCAGCGTGACCCGGATAATGCTGCTCTGGTCGGCCGCCTGGCCAGCGAACTGGCGATGGCGGACACCATTGAA
ACCGCCTTCATTATGCGTCGCATGATCACTACCGGGATGTCCGAGCCCAATGCCTCCGCACAGAAAGTGGCGATGGAAGA
GGGCGATCGGCGTATCGAGGCGCTGGATCGCGAGATCACTGCGCTGAAGAATGAAATGGAAATGAAACGCGAGATTTCCC
GTAACGCGGTGCTGACCATCATCGATCGCGAGAACAACCGTGCGGAAACCAACCCGCAGCGTCAATCGGTTGACAGCCCG
GACACCAAGTTTAACCAGTTGGCCGTACCGGAAAGCGACCAGTAA

Protein sequence :
MNNTMNKRTFRGRRSLLSLWVVSSLMLVGMNAHADDNDDNGTLFGISLPQVNDSNIGYGKSASGAVSDKLFYSLGGGSVI
SQPATRGNMQRLGMNLGWSSDLMCGNFDLKTTIGNQLNGVTDGFKNLMGSVIQGATGAVASLPAMAIQRANPGLYEMLTN
GVLQGGVAFDKAQLNCQNLSKRMMDMADTGGWSQAAAMEEAKSLVNNGDADAVRSMNATEKVTGQSGQTWIGGQKRGGAG
QPAIKPTHDLAAAGYNMMNALPVTSTSSVSGSSCTGGSCAKYASSEEAAAAVVKVLGDSSLRTCKDAAQCTSGEGSEQPG
STVAGTGFAPMLEEATKANNEQLAKLVNGAEKPTTANLAKLKTGSLAVTAGVIKALQRDPDNAALVGRLASELAMADTIE
TAFIMRRMITTGMSEPNASAQKVAMEEGDRRIEALDREITALKNEMEMKREISRNAVLTIIDRENNRAETNPQRQSVDSP
DTKFNQLAVPESDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 5e-122 64
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 4e-121 64
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 8e-122 64
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 2e-122 64
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 2e-122 64
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 4e-122 63
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 9e-125 60
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-70 41