Gene Information

Name : SerAS13_3112 (SerAS13_3112)
Accession : YP_006025951.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3303068 - 3304351 bp
Length : 1284 bp
Strand : -
Note : KEGG: spc:Sputcn32_3829 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein

DNA sequence :
ATGGTACTGGCTGGGGCAATTTTTATTCTGACGCTCATTTTGGTGATCTGGCAGCCAAAAGGGTTGGGCATTGGCTGGAG
CGCCTCGCTCGGGGCGGTGCTGGCGCTGCTGACCGGCGTGGTACACCCCGCTGATATTCCGCTGGTTTGGCACATTGTCT
GGAACGCCACGGCGACCTTTATCGCGGTGATCGTCATCAGCCTGCTGCTGGATGAATCCGGCTTCTTTGAGTGGGCGGCG
CTGCACGTTGCGCGCTGGGGCAAGGGTAAAGGGCGGTGGTTGTTCACCTATATTGTGTTGCTGGGGGCCAGCGTGGCGGC
GCTGTTCGCCAACGACGGCGCGGCGCTGATCCTTACGCCGATTGTGATTGCGATGCTGCTGGCGCTGGGGTTCAGCTCGG
GCGCCACGCTGGCGTTCGTGATGGCGGCGGGATTTATTGCCGACACAGCCAGCCTACCGTTGGTGGTCTCTAATCTGGTG
AACATCGTCTCGGCGGATTTTTTCAAGCTGAGCTTTACTCAGTATGCCGCCGTGATGGTGCCGGTGGACATTGCCGCCAT
TGTCGCAACGTTGGTGATGCTGCACCTGTATTTTCGCAAGGATATTCCGGTGAGCTATGACCTGGCGCTGCTGCGACCGC
CGCGCCAGGCGATCCGCGATTTGCCGACCTTTAAAGCCGGTTGGGGCGTGTTGGCCTTGCTGCTGGTGGGTTTCTTTGGC
CTGGAGCCGCTTGGCGTACCGGTTAGCCTGGTCGCCGCCGTGGGGGCGTTGATCCTGCTGGCAGTGGCGAAAAGGGGGCA
TGCGATTGATACCGGTAAAGTGTTGCGTGGTGCGCCCTGGCAGATCGTGGTGTTCTCGTTGGGCATGTACCTGGTGGTCT
ACGGTTTGCGCAACGCGGGATTAACCGATCTGCTGTCCGGTATGCTGGATAGCCTGGCCGAGCGGGGGCTGTGGGTGGCC
ACGATGGGGACCGGTTTTCTGGCGGCGTTCCTGTCTTCGATCATGAATAACATGCCGACGGTGCTGGTGGGCGCGCTGTC
GATCGACGGCAGCAACGCGGACGGCGTGATCAAGCAGGCGATGATTTACGCCAACGTAATAGGCAGCGATCTGGGGCCGA
AAATTACCCCGATCGGCAGCCTGGCTACGCTGCTGTGGCTGCATGTGCTGTCGCAGAAAAATATCGTCATCACCTGGGGA
TATTACTTCCGGGTGGGGATAGTGATGACTCTTCCGGTGTTGTTTGTCGCGTTGGCCGCTCTGGCCCTGCGCCTGTCGTT
TTAG

Protein sequence :
MVLAGAIFILTLILVIWQPKGLGIGWSASLGAVLALLTGVVHPADIPLVWHIVWNATATFIAVIVISLLLDESGFFEWAA
LHVARWGKGKGRWLFTYIVLLGASVAALFANDGAALILTPIVIAMLLALGFSSGATLAFVMAAGFIADTASLPLVVSNLV
NIVSADFFKLSFTQYAAVMVPVDIAAIVATLVMLHLYFRKDIPVSYDLALLRPPRQAIRDLPTFKAGWGVLALLLVGFFG
LEPLGVPVSLVAAVGALILLAVAKRGHAIDTGKVLRGAPWQIVVFSLGMYLVVYGLRNAGLTDLLSGMLDSLAERGLWVA
TMGTGFLAAFLSSIMNNMPTVLVGALSIDGSNADGVIKQAMIYANVIGSDLGPKITPIGSLATLLWLHVLSQKNIVITWG
YYFRVGIVMTLPVLFVALAALALRLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 6e-143 84
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-96 58
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-98 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 9e-94 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS13_3112 YP_006025951.1 arsenical pump membrane protein BAC0576 Protein 3e-145 85
SerAS13_3112 YP_006025951.1 arsenical pump membrane protein BAC0578 Protein 4e-146 85
SerAS13_3112 YP_006025951.1 arsenical pump membrane protein BAC0031 Protein 7e-144 83
SerAS13_3112 YP_006025951.1 arsenical pump membrane protein BAC0577 Protein 7e-139 81
SerAS13_3112 YP_006025951.1 arsenical pump membrane protein BAC0574 Protein 5e-97 58
SerAS13_3112 YP_006025951.1 arsenical pump membrane protein BAC0575 Protein 3e-97 58