Gene Information

Name : SerAS13_0290 (SerAS13_0290)
Accession : YP_006023177.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 337551 - 338462 bp
Length : 912 bp
Strand : +
Note : TIGRFAM: integrating conjugative element protein, PFL_4704 family; KEGG: ypz:YPZ3_0316 hypothetical protein

DNA sequence :
ATGATGAAAGCACGCGTTCTTGCGCTTTCCCTGAGTGTGCTTCCCCTGGCGGCGATGTTCACCGTACCGGTAGCCCAGTC
GGAAGAGCTGATGAAATGGGAGCGTATCCCGCTGCAAATCCCGCTGGCCGTCGGCAAGGAGCGGGTGCTGTTTGCCGATA
AAAATGTTCGCGTCGGTTTCCCGCCGGCACTGAACGGCAAGCTGCGGGTGCAAAGCAGTGGCGGGGCTGTTTATCTGAAA
GCCGATGCCGCATTTCCGCCAACGCGTCTGCAACTGCAGGACGTCGAAAACGGGGGGGTTATTCTCCTCGATGTGACGGC
ATCGGACAAAGGCTCCGCCGAGCCGGTGCGTATTGTCTACAGCGGTGATGTGTCGTCGATCAGTAGCAGTAATGATACCG
CGACCTCGTCAGCCGGGAGCCCTTCGGCAGCGCCTGGGGCGGAAGACGGCACCCAGGCGAAGCGTAAAAAAATCAGATAC
AACGCCCCGCTGCCGGTGGTGCTGACACGCTATGCGGCACAAAGCCTGTACGGTCCGGTGCGCACGGTTGAGGCGGTGCC
CGGCATTCACCCGGTCAACCCGCACCTGCCGAAACGTATCACCACACTGTACCCGTCAGAGCCGGTGGCCATCACCCTGC
TGGGCGGCTGGGGTATTGGCAGTCGTAACGTTGTGGCGCTAAAAGTGCAGAACACCGCCAGTCGCAAAATCATCCTGGAT
CCGCGGGTACTGCAGGGGCAGTTCGTGACGGCCACCTTCCAGCACCGTTATCTGGGGCCGGTGGGTACCCCGGAGGACAC
TACCACGCTGTACCTGGTCACCGCCGGTCGCCCGGATGGGGCGTTTGTCGCGGAGCCGTCGGGGGTTCGCAAAGCGGTGA
AGGCAGCGAAGAAGGGGGCAAACCATGGCTGA

Protein sequence :
MMKARVLALSLSVLPLAAMFTVPVAQSEELMKWERIPLQIPLAVGKERVLFADKNVRVGFPPALNGKLRVQSSGGAVYLK
ADAAFPPTRLQLQDVENGGVILLDVTASDKGSAEPVRIVYSGDVSSISSSNDTATSSAGSPSAAPGAEDGTQAKRKKIRY
NAPLPVVLTRYAAQSLYGPVRTVEAVPGIHPVNPHLPKRITTLYPSEPVAITLLGGWGIGSRNVVALKVQNTASRKIILD
PRVLQGQFVTATFQHRYLGPVGTPEDTTTLYLVTAGRPDGAFVAEPSGVRKAVKAAKKGANHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 7e-72 65
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 7e-72 65
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 8e-67 61
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 2e-66 61
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 9e-68 60
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 3e-66 59
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-50 48
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-50 47
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 5e-50 47
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-49 47
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-49 46
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 8e-49 46
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-40 44