Gene Information

Name : SerAS13_1954 (SerAS13_1954)
Accession : YP_006024802.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.28
Position : 2106449 - 2107153 bp
Length : 705 bp
Strand : +
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: spe:Spro_2002 lipoprotein transporter ATP-binding subunit; PFAM: ABC transporter-like

DNA sequence :
ATGAGTAACCATCTTTTGCTGCAGTGCGAAAACCTGTGCAAGACCTATCAGGAAGGCAACCTGCATACCGACGTACTGCG
TAATGTCAGCTTTGCCATGCAGCCGGGTGAGATGATGGCGATTGTCGGCAGCTCGGGTTCCGGTAAAAGCACCCTGTTGC
ACCTGCTGGGCGGGCTGGATTCACCGACCTCCGGCGAAGTGATCTACAAAGGCCAGTCGCTGAATACCCTGTCGTCGGCG
GCCAAGGCTGAACTGCGCAACCGCCAGTTGGGCTTTATCTATCAGTTCCACCACCTGTTACCGGACTTTACCGCGTTGGA
AAACGCCGCGATGCCGCTGTTGATCGGCGGCATGAAACCGGCCCAGGCGCAGGACAAGGCGCTGGAAATGCTGACGGCGG
TCGGGCTGGAAAAACGCAGCAAACACCGGCCTTCGGAGCTGTCCGGCGGCGAGCGTCAACGCGTGGCGATCGCCCGTGCG
TTGGTGAATAACCCGTCGCTGGTGCTGGCGGACGAACCGACCGGCAACCTGGACAAACGCACCGCCGACAGCATCTTTGA
TCTGCTCGGTGAGCTGAACGTGCGTCAGGGCACCGCCTTCCTGGTGGTGACCCATGATCTGCAACTGGCCAAGCGTCTCA
GCCGTCAGCTGGAAATGGCCGACGGCCACCTGCAGGCGCAACTGACCCTGATGGGAGCCGAGTAA

Protein sequence :
MSNHLLLQCENLCKTYQEGNLHTDVLRNVSFAMQPGEMMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYKGQSLNTLSSA
AKAELRNRQLGFIYQFHHLLPDFTALENAAMPLLIGGMKPAQAQDKALEMLTAVGLEKRSKHRPSELSGGERQRVAIARA
LVNNPSLVLADEPTGNLDKRTADSIFDLLGELNVRQGTAFLVVTHDLQLAKRLSRQLEMADGHLQAQLTLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS13_1954 YP_006024802.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 5e-40 47
SerAS13_1954 YP_006024802.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 5e-40 45
SerAS13_1954 YP_006024802.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 2e-36 41