Gene Information

Name : SerAS13_1116 (SerAS13_1116)
Accession : YP_006023985.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Virulence
Product : ParB domain-containing protein nuclease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1224169 - 1224786 bp
Length : 618 bp
Strand : +
Note : KEGG: eci:UTI89_C2237 hypothetical protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease

DNA sequence :
ATGACTTTAAGTGAAATAAAGAATGTCATCAGCACATATTTAAATGAAATAACATCTGATGATGAAAAAATTAATTCAAT
CAACCAATTAAAAAGCACATTACATGAATTTAGCCCTTTTGCAAAAGAGCCAGTAGACTGTGTTTTATGGGTCAAAACAA
ACCAGATAGTCGCTAATGATTACAACCCTAACAGAATGGCCCCATCGGAAAAAAAACTCCTGAAACATTCTCTTAATACC
AATGGATTTACACAGCCAATTGTTGTGCATGAAGAAAATGGGAGGTATACAGTTGTTGATGGTTTTCATAGATATGTAAC
AGGAAATAAGATCCCAAGATTAAAAAAATATTTACCTATTACGTGTGTGACACCTGAGCAGGGTGTGAAAACATGCCGCG
TTGCTGCCACAATCCGACACAACAGGGCCCGGGGAAAACATTATGTTGAGCCAATGTGTGATATAGTACGCGAGCTCTCG
CGATTAGGATGGAGCGATGAGCGGATAAGTAATGAGTTAGGCATGGATGCAGATGAGGTATTAAGACTAAAACAAATAAG
TGGCCTGGCAGAATTGTTTAGACAAGATAACTTTAGTGAAGCCTGGACTGTAAAGTGA

Protein sequence :
MTLSEIKNVISTYLNEITSDDEKINSINQLKSTLHEFSPFAKEPVDCVLWVKTNQIVANDYNPNRMAPSEKKLLKHSLNT
NGFTQPIVVHEENGRYTVVDGFHRYVTGNKIPRLKKYLPITCVTPEQGVKTCRVAATIRHNRARGKHYVEPMCDIVRELS
RLGWSDERISNELGMDADEVLRLKQISGLAELFRQDNFSEAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-64 63
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-62 62
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 4e-64 62
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 4e-64 62
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 8e-64 62
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 8e-64 62
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 1e-62 61
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-48 58
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-48 58
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-48 58
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 4e-28 46
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 2e-27 44
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 1e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS13_1116 YP_006023985.1 ParB domain-containing protein nuclease VFG1505 Protein 1e-64 63