Gene Information

Name : SerAS13_1110 (SerAS13_1110)
Accession : YP_006023979.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Virulence
Product : Pili assembly chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1217242 - 1217940 bp
Length : 699 bp
Strand : +
Note : PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: ecc:c1241 F1C periplasmic chaperone

DNA sequence : 
ATGATTAGAGCTATAAATATAAAGGCCATCGTGGCAACTTTTTTTGTTTTCCTTTCGATACCTCAAAGTCATGCAGGTGT
TGCACTTGGTGCAACCAGAGTTATCTACCCGGCAGAACAAAAGCAGGTACAGCTGGCCGTCACGAATAATGACGACAAAG
GCAATTACCTTATTCAGTCGTGGATTGAAAATGCCGAAGGGAAAAAAGATAACCGTTTTGTTATTACACCCCCGTTATTT
TCAATGATGGGAAAGAAGGAGAATACACTGAGGATCATTGATTCCTCAAATGATACGCTCCCCAAAGATCGCGAGAGCTT
ATTCTGGATCAATGTAAAAGCGATACCCGCTCTTGATAAAGCCAAAGAAAATGAAAATTATCTGCAGTTTGCCATTGTCA
GCAGAATTAAACTTTATTATCGCCCAAAAGGGTTGGCTATTGCACCAGAGCAAGCGTCTGAGAAGCTTCGTTTTTCTATC
CAAAAGGACAAGTTGGTGTTAAATAATCCTACGCCATATTATTTAACTGTTACGGATTTGAAAATTGACGGTAAAGCCTT
AGAGCACACAATTGTGCCTCCAATGGGCAAAACCTCCGTTTCCATCCCTTCCGGGGTAGGTGCAGGAGGCGATATTACCT
ATAAAACCATCAACGATTATGGTGCCATTACATCAGCGCGAAAAGGGCTAATAGAGTAA

Protein sequence : 
MIRAINIKAIVATFFVFLSIPQSHAGVALGATRVIYPAEQKQVQLAVTNNDDKGNYLIQSWIENAEGKKDNRFVITPPLF
SMMGKKENTLRIIDSSNDTLPKDRESLFWINVKAIPALDKAKENENYLQFAIVSRIKLYYRPKGLAIAPEQASEKLRFSI
QKDKLVLNNPTPYYLTVTDLKIDGKALEHTIVPPMGKTSVSIPSGVGAGGDITYKTINDYGAITSARKGLIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 9e-78 72
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 9e-69 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS13_1110 YP_006023979.1 Pili assembly chaperone VFG0911 Protein 4e-78 73
SerAS13_1110 YP_006023979.1 Pili assembly chaperone VFG1644 Protein 5e-78 72
SerAS13_1110 YP_006023979.1 Pili assembly chaperone VFG0875 Protein 2e-70 62
SerAS13_1110 YP_006023979.1 Pili assembly chaperone VFG0445 Protein 8e-50 47
SerAS13_1110 YP_006023979.1 Pili assembly chaperone VFG0455 Protein 8e-42 43