Gene Information

Name : SerAS13_0985 (SerAS13_0985)
Accession : YP_006023860.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.193
Position : 1090245 - 1091354 bp
Length : 1110 bp
Strand : +
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: spe:Spro_1072 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: Bacterial bifunctiona

DNA sequence :
ATGCATAACGACGAATTTTATATGGCGCGCGCCTTTGAGTTGGCGCGGCTAGGGCGTTTCACTACCGCACCGAACCCGAA
CGTCGGCTGCGTGATCGTGCGTGACGGCGAAATCGTCGGCGAAGGTTATCACCTGCGTGCCGGCGAACCCCATGCGGAAG
TGCATGCGTTGCGCATGGCGGGCGAGCGGGCGCGGGGCGCCACCGCTTATGTCACGCTGGAGCCCTGCAGCCACCACGGG
CGTACGCCTCCCTGCGCAGATGCGCTGGTCGCCGCTGGCGTTGCCCGCGTGGTTGCGGCGATGCAGGATCCCAACCCTGA
GGTTGCCGGTCGTGGCCTGTACAAGCTGCAACAGGCGGGTATAGACGTGCGTCACGGCATGATGCTGGCTGAAGCTGAAG
CGGTGAATCCGGGTTTTCTCAAACGCATGCGCACCGGTTTCCCTTACATACAGCTGAAGCTGGGCGCGTCGCTCGACGGC
CGCACGGCGATGGCTTCCGGCGAGAGTCAGTGGATCACTTCACCGCAGGCCCGGCAGGACGTGCAGCGTCTGCGGGCGCA
AAGCGCCGCCATCCTGAGCACCAGCGCTACCGTGTTGGCCGACGATCCGTCGCTGACGGTGCGTTGGGATGAGCTGGATA
CCGCCACTCAGAGCCTCTACCCGCGTGAAAATCTGCGCCAACCGTTGCGCATTATCCTCGACAGCCAGAACCGCGTAACG
CCGCAGCATCGGGTAGTGCAGCAGCCGGGAACGACCTGGCTGGCGCGGTTGCAGCCGGACGATCAGAACTGGCCGCAGGA
TGTTGAACAACTGACGTTTCCGGCGCACGGCGGCGGGATCGATCTGGTCGTGATGATGATGCAGTTGGCGAAACGCCAGG
TGAATTCCATCTGGGTAGAAGCCGGCGCTGCGCTTTCCGGCGCGTTGTTGCAGGCAGGGCTGGTTGATGAGCTCATTTTG
TACATCGCGCCAAAACTGATGGGTGATAATGGGCGCGGCCTGTGCCGGTTGCCGGGCCTTGAGTGCCTGGCCGATGCGCC
GGAATTCGTCTTCAGCGAAGTGCGGCAAATCGGCCCCGACCTGCGCTTGCGGCTGAAGCCGAAATACTGA

Protein sequence :
MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALRMAGERARGATAYVTLEPCSHHG
RTPPCADALVAAGVARVVAAMQDPNPEVAGRGLYKLQQAGIDVRHGMMLAEAEAVNPGFLKRMRTGFPYIQLKLGASLDG
RTAMASGESQWITSPQARQDVQRLRAQSAAILSTSATVLADDPSLTVRWDELDTATQSLYPRENLRQPLRIILDSQNRVT
PQHRVVQQPGTTWLARLQPDDQNWPQDVEQLTFPAHGGGIDLVVMMMQLAKRQVNSIWVEAGAALSGALLQAGLVDELIL
YIAPKLMGDNGRGLCRLPGLECLADAPEFVFSEVRQIGPDLRLRLKPKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-57 48
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-57 48