Gene Information

Name : Sbal175_0627 (Sbal175_0627)
Accession : YP_006019226.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 726698 - 727861 bp
Length : 1164 bp
Strand : +
Note : KEGG: spc:Sputcn32_0616 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

DNA sequence : 
ATGGCAGAGCGTCAATTAGCCACACTGGCAGTGCGTCAGGGTATCGAAAGCGATACTCAATATGGCGCAGTTGTGCCACC
GATTTATTTGTCGACTAATTACGCCTTCGATGGTCATAAAAATCCCCGCGAATTCGATTACAGTCGTTCAGGCAACCCAA
CGCGCTGCATTTTAGGCGAAGCATTAGCGCAATTAGAAAAAGGCGCCACTGGCATAGTGACCTGCACTGGTATGGCGGCC
ATTGCCTTAGTGACCACATTGCTCGGCCCTGATGACTTGTTGGTTGTGCCCCACGATTGTTACGGCGGTTCTTACCGTTT
ATTTACCAACTTGGCGAAGAAAGGCCAGTTTAAGTTGATTGTGGTCGATCAAACCGACAGCCAAGCGTTAGCCGCCGCCA
TTGCGCAGAATCCTAAGATGGTGTGGCTCGAAACCCCATCGAACCCGTTATTGCGTGTGGTAGATATCGAAGCCATTGCT
AAGGCGAGCCATGAGGTCGGCGCGCTGGTGGTGGTCGATAACACTTTTTTATCGCCGATATTGCAACAACCCCTATTGTT
AGGCGCGGATATCGTTATCCACTCCACCACTAAATACATCAATGGTCACAGTGATGTGGTTGGCGGCGCTGTGGTTGCCA
AAGATGCACAAATTGGCGAAAGCTTACATTGGTGGTCGAACACGTTAGGCTTAACGGGATCGGCTTTTGATAGTTACTTA
ACCCTGCGCGGCCTACGTACGTTAGCGGTGCGAATTCGTGAACATCAAGCCAATGCCCAGCGCATTGTTGAGGTATTGAC
GCAAAGCCCTGTGGTGAGCAAAGTTTATTACCCCGGTCTTGCGGATCACCCTGGTCACACCATTGCAGCCAAGCAACAAA
AAGGCTTTGGCGCTATGCTGAGTTTTGAGCTCAAGGGCGGCGAGGCCGAAGTCGTGGCCTTTTTAGGTGCACTCAGCTTA
TTTAGCGTGGCGGAAAGTTTAGGTGGCGTTGAAAGTTTAGTGGCCGTGCCCGCAACTATGACCCACAGAGCCATGGAGCC
GCAGGCGCGTTTTGAGGCAGGCATTAAAGACACCCTATTGCGTCTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTG
CAGATATTCAAGCAGGATTAGCCGCCGTTGCGGCTTGTCAGTAG

Protein sequence : 
MAERQLATLAVRQGIESDTQYGAVVPPIYLSTNYAFDGHKNPREFDYSRSGNPTRCILGEALAQLEKGATGIVTCTGMAA
IALVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLIVVDQTDSQALAAAIAQNPKMVWLETPSNPLLRVVDIEAIA
KASHEVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDAQIGESLHWWSNTLGLTGSAFDSYL
TLRGLRTLAVRIREHQANAQRIVEVLTQSPVVSKVYYPGLADHPGHTIAAKQQKGFGAMLSFELKGGEAEVVAFLGALSL
FSVAESLGGVESLVAVPATMTHRAMEPQARFEAGIKDTLLRLSVGIEDAADLVADIQAGLAAVAACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-59 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-61 41
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_0627 YP_006019226.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 2e-53 41