Gene Information

Name : Sbal175_0544 (Sbal175_0544)
Accession : YP_006019144.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 629309 - 629911 bp
Length : 603 bp
Strand : -
Note : KEGG: spc:Sputcn32_0534 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator L

DNA sequence : 
ATGTCTACAAAACTGCCGCTGTATTTAGTCGATGACGATGAAGCGATTCTGGATTCGCTGGGTTTTATGCTCGGACAATT
TGGCTACCAAATACAAACCTTCAACAGCGGCCGCGACTTCCTTGCGCACTGTGCATTATCGCAGGCGGGTTGCGTGATTT
TAGATAGCCGAATGCCGGAGATCACCGGCCAAGAAGTGCAGCAAAAACTGCTCGAAACCCACAGTCCGCTTGGCGTCATC
TTTCTCACTGGCCACGGCGACTTACCTATGGCGCTGAGCGCCTTTCGTAAGGGAGCCTGCGACTTTTTTCAAAAACCTGT
GTCCGGCAAGGCATTAGTACAAGCGATAGAAAAGGCGCAACGTGAAAGCCAAACGACCTTCGAGCAGCAAAGTTTACAAC
ATAAGTTTGACCAACTGACCGAGCGCGAGCAGCAAGTGTTAGCCCATGTGATCCAAGGCATGACCAATAAGCAAATCTCA
GAAGCCATGTTTTTATCCCTGCGCACGATTGAAGTACACCGCGCAAAAATCATGAAAAAACTCAAAGTGAATAATATGGC
AGAGTTAGTGCAGCACTTAGGGAATTTGCATTCTGTTTTATAA

Protein sequence : 
MSTKLPLYLVDDDEAILDSLGFMLGQFGYQIQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQEVQQKLLETHSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQTTFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQIS
EAMFLSLRTIEVHRAKIMKKLKVNNMAELVQHLGNLHSVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-35 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-35 42
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-35 42
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-35 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 1e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_0544 YP_006019144.1 LuxR family two component transcriptional regulator VFG0488 Protein 4e-36 42