Gene Information

Name : Sbal175_4145 (Sbal175_4145)
Accession : YP_006022671.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : H+transporting two-sector ATPase alpha/beta subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4872211 - 4873473 bp
Length : 1263 bp
Strand : -
Note : KEGG: vpa:VPA1338 putative ATPase YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGATCAAACATTTTTTTAAGGTTAAAGAATCTTATCAAGATACAGTAATTTGTCATGTCAGTATAAATACTTTTGTGGG
GCAGGAGTGTTTCATTATCACAGTCGCTAATGAGCGCATTCGTGGTGAGATAATGAAAATTACTGGTAAAAGAGTCGAAA
TTAAGTTGCTTCAGCCTGGGGCGATTCAACGGGGGAGTAAAGTGGAAATTACCCCTCGGCGCTTCTGTTTCCCACTGAAT
GAAACCGCTCTTATTGGTAAGGTCATTAATTGCTATGGCGAGTCATTGTATGGTGAACAATATTTGGGCTGTGAGGGGGA
TTACTATGATTTACCCATTATCGATAAGCCTATACCGCTTAATATTCGTGCACCCATTGACACTGTGTTTCCGACAAAAA
TTAAAATTATTGATGGTTTATTCACTATTGGAGTTGGGCAGCGTTTAGGCCTATTTGCTCCCGCTGGGGCAGGCAAAACT
ACCACGGTTTCGATCATGGCAAATAACATGGATGCCGATGTGGTGATTTTCGCCATGATTGGCGAGCGCGCAAGGGAGGT
GGTCGAGTTTTTGGAGGGAGAGATTGGCCCTGCTGTGATTCAAAAATCGATCACTATAGTGTCTACATCCGAAGCAAACC
CGTTAGAAAAAGTGAGATCGGGTTTAGTCGCAGTGTCCATTGCGAGGCATTACATGGCTCAGGGCAAGAAAGTGGTGCTC
TATTTCGATTCATTGACACGTTTTGCACGTGCGCAAGCCATGTTAGATGGCACTCCCATTGAGGGCGGGATCCCCATTGG
AGTGTCTTTAGCACTGTCACGACTGGTAGAGAATTGTGGTAACTCTATTCATGGTTCAGTGACAGGGATTTTTACAGTAC
TGATTGAAAAAGAAATTGATGAAGACCCTATTGCACATGAGGTTAAATCATTGATTGATGGACATTTGGTCTACTCAACG
ACAATTGCCTCAACTGGGCGTTACCCCGCCATTGATGTTCTAAAGAGCAAGAGCCGTTTGCAAAATAAAGTTCAGGACTC
TCAATATGTGAGTCTTTCTGAAAAGTTCAAAGATATGGTGTATCGCTATTTTAATGTTGAACTGCTAATCCGTGTCGGCG
AGTACGAGAAAGGTAACGATTTAGCGACCGACGAAGCGATAGATCGCTTCCCATATATCATGGAATTTTTGAAGCAAGGT
TATGATGGGGTTGAGTATGAAGAAACCCTCCAAGCAATGGACCGAATTTGGTCAACTTATTGA

Protein sequence :
MIKHFFKVKESYQDTVICHVSINTFVGQECFIITVANERIRGEIMKITGKRVEIKLLQPGAIQRGSKVEITPRRFCFPLN
ETALIGKVINCYGESLYGEQYLGCEGDYYDLPIIDKPIPLNIRAPIDTVFPTKIKIIDGLFTIGVGQRLGLFAPAGAGKT
TTVSIMANNMDADVVIFAMIGERAREVVEFLEGEIGPAVIQKSITIVSTSEANPLEKVRSGLVAVSIARHYMAQGKKVVL
YFDSLTRFARAQAMLDGTPIEGGIPIGVSLALSRLVENCGNSIHGSVTGIFTVLIEKEIDEDPIAHEVKSLIDGHLVYST
TIASTGRYPAIDVLKSKSRLQNKVQDSQYVSLSEKFKDMVYRYFNVELLIRVGEYEKGNDLATDEAIDRFPYIMEFLKQG
YDGVEYEETLQAMDRIWSTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-53 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-53 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 6e-54 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-54 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-54 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-49 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-49 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 9e-50 41