Gene Information

Name : Sbal175_3899 (Sbal175_3899)
Accession : YP_006022427.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4610947 - 4613022 bp
Length : 2076 bp
Strand : +
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: shw:Sputw3181_0304 ATP-dependent DNA helicase RecG; SMART: DEAD-like

DNA sequence :
TTGCAGCAATTGGATCTTGTTCCGATCACCGACCTCAAAGGCGTCGCCAAAAAGGTCGCGGAGAAACTCGCAAAGCTCGG
CATCACAACAGTACAAGACCTGCTGTTTCACTTACCCCTGCGCTACGAAGACAGAACCCAAATCTATCCGATTGCCGCCC
TTATGCCCGGCAGTTACGGCACCATAGAGGCTGAAATCCAATCGACGCAAATCATCCAAGGCCGCAAGCGTATGCTGGTC
TGCAATGTGCGCGACGATACGGGCAGCTTGAGCCTGCGCTTTTTCAACTTTTCTGTCGCCCAGCGTAATGCCATGCAAAA
TGGTTTAATGATCCGCGCCTACGGTGAAGTGCGCCGTGGCGGCCATCAAGCTGAGATAGTGCATCCAGAATATAAAGTCG
TGTATCCCGGTGAAGATGTTCACCTAAGCGATACCCTAACGCCGATTTATCCCACAACTGAGGGCTTAAAACAGGCGAGT
TGGCTCAAGCTGACCGAGCAAGCTTTGGTATTACTGGAAGATGGCGGCTTAACTGAGCTGCTGCCACCGCAGTTGCAACC
GAATAACATCAGCCTTAAACAAGCGTTGCAAACGCTGCATCGACCTCCTGCGGGGATCTCTCAGTTCGATTTAGAGTTAG
GTCAACACCCAGCCCAGCAGCGACTGGTGCAGGAAGAGTTACTCGCTCATAATCTCAGCATGCTACGCCTAAGGCAGCGC
AGTAATTTAGATGCAGCGGTGACCATGCAGGCCACGGGGCAATTGCTCAATCCCTTCCTTGCCGCTTTGCCCTTTAAACC
CACGGGCGCCCAGCAAAGAGTGGTGGCCGATATAGGCAAAGATTTAGAAAAACCGCACCCTATGATGCGCTTAGTACAAG
GGGATGTAGGTTCAGGTAAAACCTTAGTCGCGGCGATGGCTGCGCTGCAAGCGATTGAAAACGGTTATCAAGTTGCCATG
ATGGCGCCGACCGAGCTATTGGCCGAACAGCATGCAACTAACTTTGCCGCTTGGTTTGAGCCACTCGGGCTTAAAGTCGG
TTGGCTAGCCGGTAAACTTAAAGGCAAGGCAAGAGCGCAATCCCTTGCGGATATTGAATCCGGCGCAGCCCAAATGGTGA
TTGGCACCCATGCCATCTTCCAGCAGCATGTGGTCTTTAATAAACTCGCGTTAATTATCATAGATGAGCAGCACAGATTC
GGCGTACACCAACGCTTAGGTCTGCGGGAAAAGGGCGTGAGCCAAGGTTTCCATCCGCATCAATTGATCATGACGGCAAC
GCCGATCCCGCGCACGCTAGCGATGACAGCCTATGCGGATCTCGACACATCCATTATCGATGAACTGCCGCCGGGACGGA
CACCCGTGACCACAGTGGCGATTGCCGATTCTCGCCGCAACGAAGTGCTTGAACGGGTGCGTAACGCCGTCATCACAGAT
AAACGTCAGGCCTACTGGGTGTGTACTTTGATTGAAGAATCCGAAGTGCTCGAATGCCAAGCCGCCGAAGACACGGCCGA
AGAACTGCGCCTCGCCCTACCCGAGCTCAATATTGGCCTAGTGCATGGCAGGTTGAAGAGCGCTGAGAAACAACAAATCA
TGGCCGATTTTAAGGCGGGCATCATTCATCTTCTGGTGGCGACAACAGTGATTGAAGTGGGCGTCGATGTGCCTAATTCC
AGCCTGATGATCATTGAAAACCCTGAACGTTTAGGCTTAGCACAACTACACCAACTACGCGGACGAGTCGGCCGAGGCGC
CATCGCAAGCCATTGTGTGTTACTCTACAAGGCGCCATTGAGCCATACCGCCACCCAAAGACTGAGTGTACTCAGGCAAA
GTAATGACGGTTTCATCATAGCGCAGAAAGATTTAGAAATTCGTGGCCCAGGTGAAGTGCTTGGCACTAAGCAAACGGGA
CTGGCCGAGCTGAAAATTGCCGATCTGGTGCGCGATCAAGCTTTGATCCCGCACATTCAAAAACTGGCAAATCATGTGAT
GGCGCAGGCCCCCGAAAAAGTCGATGCGATAATCTTACGTTGGCTCGGGCACAAGCAGCACTATGTGCAGGCTTAG

Protein sequence :
MQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALMPGSYGTIEAEIQSTQIIQGRKRMLV
CNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGGHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEGLKQAS
WLKLTEQALVLLEDGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSMLRLRQR
SNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENGYQVAM
MAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKARAQSLADIESGAAQMVIGTHAIFQQHVVFNKLALIIIDEQHRF
GVHQRLGLREKGVSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRNAVITD
KRQAYWVCTLIEESEVLECQAAEDTAEELRLALPELNIGLVHGRLKSAEKQQIMADFKAGIIHLLVATTVIEVGVDVPNS
SLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLGTKQTG
LAELKIADLVRDQALIPHIQKLANHVMAQAPEKVDAIILRWLGHKQHYVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-101 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_3899 YP_006022427.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60