Gene Information

Name : Sbal175_3653 (Sbal175_3653)
Accession : YP_006022185.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4319878 - 4320498 bp
Length : 621 bp
Strand : -
Note : KEGG: shw:Sputw3181_3508 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator

DNA sequence : 
ATGAGTCTTGCGTTACCTGTGTATTTAATCGATGACGATGACTCAGTGCGTCGTTCTTTGCGTTTTATGCTTGAAAGTTA
TGGTCTCAAGATCACCGACTTTGATAGCGCCGAAGCCTTTTTTACCGCAGTTGACTTAACCCTGCCGGGTTGTGCGCTGG
TTGATGTGCGTATGCCGGGCTTGAGCGGCCCGCAGTTGCATCTTGAATTAGTCGCCAAAAATAGTCCGTTAGCTGTGATT
TATTTGACCGGACATGGCGATGTGCCTATGGCGGTTGAAGCGCTCAAACTCGGTGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGCGCTAAGTTAGCCGAAGCGGTACTCAAAGCGTTGGAGCATACCAAGGCGCATCATCAAGACAATCAGTATCTTG
AGACTTATCAAGCGCTCACGCCAAGGGAGCGGGAGATACTCAACCTGATTGCTCAAGGGTTGAAGAACCAAGAGATTGCC
GATAGCCTTTGCATCGCCATGCGCACGGTCGAGATCCACCGCGCTAATTTGATGAAAGGCATGCAAGTGGGATCGTTGGC
GGAAATGATGCTGATCTATAGCCGGATCGCTGATCGCCTGCGCCTTGAAGATAACCGCTAA

Protein sequence : 
MSLALPVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGPQLHLELVAKNSPLAVI
YLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVLKALEHTKAHHQDNQYLETYQALTPREREILNLIAQGLKNQEIA
DSLCIAMRTVEIHRANLMKGMQVGSLAEMMLIYSRIADRLRLEDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-30 45
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-30 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-30 45
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-30 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 3e-30 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_3653 YP_006022185.1 LuxR family two component transcriptional regulator VFG0488 Protein 1e-30 45